YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YIL166C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	80	0.97
Transmembrane Helix	81	100	0.82
Non-Cytoplasmic	101	120	0.85
Transmembrane Helix	121	139	0.75
Cytoplasmic	140	147	0.78
Transmembrane Helix	148	166	0.77
Non-Cytoplasmic	167	171	0.68
Transmembrane Helix	172	194	0.68
Cytoplasmic	195	206	0.77
Transmembrane Helix	207	229	0.91
Non-Cytoplasmic	230	239	0.79
Transmembrane Helix	240	262	0.90
Cytoplasmic	263	322	0.93
Transmembrane Helix	323	347	0.79
Non-Cytoplasmic	348	355	0.82
Transmembrane Helix	356	379	0.84
Cytoplasmic	380	387	0.89
Transmembrane Helix	388	407	0.96
Non-Cytoplasmic	408	414	0.79
Transmembrane Helix	415	437	0.89
Cytoplasmic	438	447	0.84
Transmembrane Helix	448	469	0.81
Non-Cytoplasmic	470	482	0.89
Transmembrane Helix	483	503	0.93
Cytoplasmic	504	542	0.97

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVQKEEYDI VEKAQLSVSA ESLTSDSESI SHNPFDDFHK AERWRKVYES SGYEGLSKFD  60
   61 PEFTWTKDEE KKLVRKMDLK IFLWVFIMFA FLDLIRKNIA RAVSDNFIVD LKMNTNDYNL 120
  121 GQTVYLVIFL ASELPGNLLS KRFGPERVIP VQIVLWSVIC ITQAGLKNRG QFIATRCLLG 180
  181 MVQGGFIPDN ILYLSYYYTG AELTFRLSFF WCAIPLFQIL GSLLASGIIE MRGIHNLAGW 240
  241 QYLFIIEGFL SLSVGVASFY LMRRGPTQTG ESAFHKGKSL FTEYEEKIMV NRILRDDPSK 300
  301 GDMSNRQPVT FKEILYTLTE FDLWPLFIQG ITAFISLQTV GSYLSLILKS LNYSTFLSNI 360
  361 LAIPGQALLL INLPLAALLS RKLKEKSLCV GIANVWVLPF IVSLVALPTD TNPWIKYILL 420
  421 TGILGLPYTH SILAGWVSEI SNSVRSRTVG TALYNMSAQV GAIIASNMYR NDDKPYYTRG 480
  481 NKILLGFTCF NICMAVATKF YYISRNKYKD RKWNSMTKEE QINYLDTTKD KGMKRLDYRF 540
  541 IH