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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG9935-PB
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.58
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIASGFLLF QFLSYGLGVP PLVRIGAIFS NQPGMYNSEL AFRYAIHRLN MDKSLLPETT  60
   61 VDYYVEYVNR FDSFETVQKV CKLIRVGVQA VFSPTDSVLA THINSICDAL DIPNIGRSAH 120
  121 DFSINVYPSK QLVNYAFNDV IQYLNWTRFG ILHEKENGII NLHQLSRSFH GEVHMRQVSR 180
  181 DSYVSALNEF KGKEIHNIII DTNSNGISIL LKNILQQQMN EYKYHYLFTS FDLETYDLED 240
  241 FKYNFVNITS FRLVDTADVG VKQILKDIGL YSHHIFKKPY LNLHIKKSTI LESEPALMFD 300
  301 SVYVFAIGLQ TLEQSHSLTL LNISCEEENS WDGGLSLINY LNAVEWKGLT GPIQFKDGQR 360
  361 VQFKLDLIKL KQHSIVKVGE WTPHGHLNIT EPSMFFDAGS MNVTLVVITI LETPYVMMHY 420
  421 GKNFTGNERF YGFCVDILET ISREVGFDYI LDLVPDRKYG AKDPETGEWN GMVAQLMKYK 480
  481 ADLAVGSMTI TYARESVIDF TKPFMNLGIS ILFKVPTSEP TRLFSFMNPL AIEIWIYVLI 540
  541 AYFLVSLCIY IVGKLSPIEW KCINACDLEN ISIGNQFSLT DSFWFTIGTF MQQSPDIYPR 600
  601 AMSTRIISST WGFFSLIIVA SYTANLAAFL TTERMINPIE NAEDLASQTE ISYGTLDSGS 660
  661 TMTFFRDSVI ETYKKIWRSM DNKKPSAFTT TYEDGIKRVN QGNYAFLMES TMLDYIVQRD 720
  721 CNLTQIGGLL DTKGYGIATP KGSPWRDKIS LAILELQERG DIQMLYDKWW KNTDETCTRK 780
  781 NTSKQSKANS LGLESIGGVF VVLIAGIIVA AVVAFFEFWY NFRYNYEATP SQSVVNNKYN 840
  841 QDGILESERN YTPPDRSFWI EIAEELRYAS WCMNKQKRPA LTRTCSKCTI PKGQRINKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle