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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SIM1
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSTAVTTL ISSGAIVSAL PHVDVHQEDA HQHKRAVAYK YVYETVVVDS DGHTVTPAAS  60
   61 EVATAATSAI ITTSVLAPTS SAAAGIAASI AVSSAALAKN EKISDAAASA TASTSQGASS 120
  121 SSSSSSATST LESSSVSSSS EEAAPTSTVV STSSATQSSA SSATKSSTSS TSPSTSTSTS 180
  181 TSSTSSSSSS SSSSSSSSSG SGSIYGDLAD FSGPSEKFQD GTIPCDKFPS GQGVISIDWI 240
  241 GEGGWSGVEN TDTSTGGSCK EGSYCSYSCQ PGMSKTQWPS DQPSDGRSVG GLLCKNGYLY 300
  301 RSNTDADYLC EWGVEAAYVV SKLSKGVAIC RTDYPGTENM VIPTYVEGGS SLPLTVVDQD 360
  361 TYFTWEGKKT SAQYYVNNAG VSVEDGCIWG TSGSGIGNWA PLNFGAGSTG GVTYLSLIPN 420
  421 PNNSDALNYN VKIVAADDSS NVIGECVYEN GEFSGGADGC TVSVTSGKAH FVLYN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle