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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SKG6
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYHTHMHESL ISVTSTVSVS DASYAYARLT RRDDSDSSSS SASSTKNSKS AECTGSKQQC  60
   61 QLPTDSSHST SVTVGVAVAV PVGVIIIVLA VILCIVYRRS KKEAEEDNDP DFEGDSEFLP 120
  121 TMKDYSPGIN HLYSSDSQQD FMEKTLQQPP SDPFVGSMHS SKYNVRSATP PAIGRSWYVD 180
  181 PFQLPQESND SNSLRDFAMR VQEDGLGGYK VAAESRNASQ TSLHPDNFSN CTPIRASSRF 240
  241 QESESFRSHG SPIHNNQLSR GSATEGANKQ FTFPNEDNDS SSVSEEAEVL NESNESASND 300
  301 AFEFELDNSS EKTHERNLRF GKDDDNYELQ DIREAEHMND RSSSKSQDDD YYVSLLSPNE 360
  361 EEDIKRMKSI YQVYLDRAKT MKKEEDKADN ANDISQEENR VDNIVQNPLP SIKINNNDNI 420
  421 DNNEVPEAKH LVKEALPLNN TNLAEYGPEM AQSQKQYPVQ DTLTVNDTEA APSNRIASSI 480
  481 YSEAIQPLNY QDQYQQQEQS PVYNGHTQYP GNGYSGNPQQ QGYTAQFVQN PQWYGVPTPQ 540
  541 QQQHNHPQTL ETIGELPTPA YLAQSASSHS LTSFKRPNKQ QLLQLQTARL NGTALNPVDH 600
  601 PEMFYSPTND AYYAPQQQGQ YMKFNENGAV PSPYQLRQSV VMTNPSDLTA KPSYKPAGSF 660
  661 RSVSATNSRN NSLTTQNNIY LQQQQQQLYN SRVSGILEET DVVQPPSVGG ILPHSGSQDD 720
  721 LRKQLGSSHN YTVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle