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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94573556
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EEMSTIKEKI EERGFWGKKT EFLLAVAGNV VGLGNVWRFP YLCYRNGGGV FLIPYLVFVV  60
   61 TCGVPLFLLE TAMGQFTHEG GITCWHRLCP LAQGIGYAGQ LTVLYSCMYF TIILAWALFY 120
  121 LISSFSSQLP WASCDNIWNT DNCVNLAAGN LTFNRTTQML INSTSAATEF WERRVLSLSG 180
  181 GIEDIGKINW EILLCLIAMW IICYFCIWKG VKSTGKVVYF TATFPYVMLI VLLIRGLTLP 240
  241 GALQGIVFYL YPEPARLADP QVWMEAGTQI FFSYSVIGGV LISLGSYNQY NNNCYRDCFW 300
  301 LCLLNSGTSF VAGFAVFSVL GFMAHVQGVP IEEVAESGPG LAFIAYPQAV AMMPFPQLWA 360
  361 VCFFIMIILL GLDTQFVSVE CVITSVMDLF PEVLRRAGRR ELLVLLLCLT CFFGQLIMVT 420
  421 EGGMYVFQLF DNYACNGACL LFLSVFESLA IGWIFGAEKM FDIIEDMTES RPNYWFMLCW 480
  481 KYLTPLVSLT SFVYSMVRYT PLTFNRWYIY PDWAYVLGWL LALSSILLVP AWALGQMCAG 540
  541 KGSLKQRWRH LSSPETNFPL SFKQVQKQTA EMEDLLKSGT I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle