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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92096439
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NTSDVPGQRR SIKGLSISVS SHTLSLTHTL TMKLKLPNPG LEQRIPSHSE LEKLELQEAG  60
   61 ERPKWDNKAQ YMLTCVGFCV GLGNVWRFPY LCQSHGGGAF MIPFLILLVL EGVPLLHLEF 120
  121 AIGQRLRSGS VGVWRSISPY LTGVGIASML ASFIVGMYYN TIMAWVMWYL FNSLQEPLPW 180
  181 SQCPVNLNRT GLVSECERSS PVDYFWYRET LNTSTAIEDS GALQWWLVLC LLCAWTFLYI 240
  241 CCIRGIETTG KAVYITSTLP YVVLTIFLIR ALTLKGSVNG IKFLFTPDVN ELMNPSTWLD 300
  301 AGAQVLFSFS LAFGGLISFS SYNSVHNNCE QDAVTISIIN GLTSVYSATV IYSIIGFRAT 360
  361 ENYDICLDSN ILSLLNAFDL PEGSITENNY TVALQQLNIS RPDIIQELQL KTCDMQTLLS 420
  421 EGVEGTGLAF IVFTEAITKM PVSPLWSVLF FIMLFCLGLS TMFGNIEGVV VPLQDLNLLP 480
  481 KRWPKEVFTG LTCVVSFLTA LVFVQSSGNY WLALFDGFAG SIPLLVIALC ELIAVVYVYG 540
  541 IDRFNEDIKF MVGHKPNIFW QISWRFLSPV ILLVILIFYF ITTVSKQLTY NVWDPQSADF 600
  601 PTLKEVDYPN WISVVIFVLA GVPSLCIPGV AIGRALWRCC TRRKHKSISE KQQMSVNTIA 660
  661 

YRC Informatics Platform - Version 3.0
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