YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ECM12
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRSFHFLIK YIYIHVLLVF YFHIKQQAIM PFFIFFFSSF DGLSFDLRVV AFLAKHVFVG  60
   61 VCSPFFVVGF FGSSRVVVTE WLSKLVLPPP PVSITQVFSL SRKRGEFSSG YILIINPYKS 120
  121 FLRSLLDFSI FNNTAKNKSS TFTLNLEDVS K

Type	Start	End	Confidence
Cytoplasmic	1	10	0.78
Transmembrane Helix	11	35	0.76
Non-Cytoplasmic	36	51	0.69
Transmembrane Helix	52	74	0.85
Cytoplasmic	75	151	0.77