YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MUP3
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	64	0.99
Transmembrane Helix	65	86	0.88
Non-Cytoplasmic	87	100	0.73
Transmembrane Helix	101	124	0.91
Cytoplasmic	125	144	0.92
Transmembrane Helix	145	167	0.91
Non-Cytoplasmic	168	185	0.85
Transmembrane Helix	186	203	0.95
Cytoplasmic	204	212	0.75
Transmembrane Helix	213	234	0.91
Non-Cytoplasmic	235	254	0.93
Transmembrane Helix	255	278	0.86
Cytoplasmic	279	293	0.88
Transmembrane Helix	294	315	0.87
Non-Cytoplasmic	316	346	0.88
Transmembrane Helix	347	368	0.91
Cytoplasmic	369	389	0.95
Transmembrane Helix	390	413	0.89
Non-Cytoplasmic	414	427	0.94
Transmembrane Helix	428	447	0.91
Cytoplasmic	448	457	0.87
Transmembrane Helix	458	480	0.89
Non-Cytoplasmic	481	492	0.88
Transmembrane Helix	493	515	0.88
Cytoplasmic	516	546	0.98

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPLLFNSGK ANPSQDVFID VEVGDITTKY GSTNTGSFSS MDTVEAQAIK AETARFMEVP  60
   61 QGRHLGVFST VVLFVSRIMG SGIFAVPSVI LLNTGGNKLI YFAIWVFSAA IAFAGLYLFL 120
  121 EFGSWIPKSG GRKNFLERSF ERPRLLISVV FSCYSVLTGY ALTGSIVFGK YVLSAFGVTD 180
  181 DSWSKYVSIS FIIFAVLIHG VSVRHGVFIQ NALGGLKLIM IVLMCFAGLY TLFFYKSTGQ 240
  241 VAWDLPVTQV EKDSLLSVSS IATAFISSFF CFSGWDTVHT VTSEIKNPVK TLKVSGPLSL 300
  301 IICFVCYTMM NVAYLKVLTY EEIVSAGPLV GSVLFTKLFG PRVGGKFIAF SIAISAASNI 360
  361 LVVIYSISRV NQEIFKEGYL PFSIHMSKNW PFDAPLPSIS LCGFITIAWI LILPKEGESF 420
  421 NYLVSMDGYG NQFFLLLVAI GLFIWRFKHK NEVPEIRAST FGVLAIITLS LYMLMAPFFA 480
  481 DPSLNRVGFL PPYQIMSLLV IVACFFFWLV KFVLLPKFFH YKLLPKITYL HDGLIVTEWV 540
  541 KKPCLC