YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GOS1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSQPSFVTI RGKAISLETQ TESLLSKYST FAQTTSSEQT GQEKKIDKQL EGILGQRQDV  60
   61 IDSLTQICDS NPAISASKLS QLHRHKEILQ DHWKSFRNIR SSIQQERNRL NLLFSVKNDI 120
  121 ANSTTDAPAP IGDADEYIQN ETRRIDQSNN VVDRLISQAW ETRSQFHSQS NVLNTANNKV 180
  181 LQTLQRIPGV NQLIMKINTR RKKNAFVLAT ITTLCILFLF FTW

Type	Start	End	Confidence
Cytoplasmic	1	203	0.98
Transmembrane Helix	204	222	0.95
Non-Cytoplasmic	223	223	0.99