YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: WSC4
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTSMVSAKV SIWLVCSVIC SSLVRATQSV CSSQNTATTD GVRNQFQSNG WCSNNCAGHQ  60
   61 FAIVQGFMCW CSDSEPSTQT SVGDCSGTCP GYGYEDCGNA DKDLFGYIYL GQTPLSSVQS 120
  121 VETSTESSVY VSSSSITSSS STSIVDTTTI SPTLTSTSTT PLTTASTSTT PSTDITSALP 180
  181 TTTSTKLSTS IPTSTTSSTS TTTSTSSSTS TTVSVTSSTS TTTSTTSSTL ISTSTSSSSS 240
  241 STPTTTSSAP ISTSTTSSTS TSTSTTSPTS SSAPTSSSNT TPTSTTFTTT SPSTAPSSTT 300
  301 VTYTSTTASP ITSTITSVNL QTSLKYSVIT VTSVHTMDTN ISEITSRYLT MKKVITQIYS 360
  361 STLGATPTSA VATTSASVGG RITNNNNSNT TNSNTPTNKS TEKKGYWDSP GKIAATFVVV 420
  421 GVVCLVIICI LIYLIHHYRT RPARKAQDFE NEYQSKFYQS KYPNEVTTTT LHTPSPSSNS 480
  481 TFSTPRLIYT DEKGQIMSES PSPRQSTYSL TAGSPPNDPS TLASPFHDPI LPRRTSTFLH 540
  541 SPIQKQHEKM ESNVTLGEDT VLVDQRLDPS KMLNTLANDD ATNHSTISLS DNVDYSRRVL 600
  601 RLMNE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle