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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VPS62
Protein type: Transmembrane
Type Confidence: 0.58
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRISKNSHKR QRTRLYFLVT FIIYSIIPCR AVLVPWLDDD PFEATLLEMG DEPWSKDILS  60
   61 STPPLHPSEV TEDNKSLKQR GNVPQYVIDN SPLLHLYSEE KYWPADVKDF VKRFQLRDHS 120
  121 GEKIINEHLR DLSDLQEYYS VELENGTWGR VSSEGTYMTS LDDFDKGPDW LLGEQPEYGT 180
  181 GHIKKAPAVL FVVDKGNGWV DAFWFYFYPF NWGPYIMGSG PWGNHVGDWE HSLVRFYKGE 240
  241 PQYLWMSAHG GGSAYKFEAI EKIKRLRRVD GKLTNEVIKK PLIFSARGTH AHYASVGQHA 300
  301 HDVPFFFMPL SDFTDRGPLW DPSLNYYAYT VTVGEKMTPC GAEETKMGLE WLSFKGAWGD 360
  361 KQLRPRDPRQ KWCPFQWKYI DGPKGPLFKN MERVSLCQRF KWWNFWKGCP ARRYIKRGEG 420
  421 LDAEKNDLVG DNCGILLYNI RPKWLRSILR FLTWRGSVCF IMDYFTG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle