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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NNF2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEQFTNQKK VSHLQSLMNT KRSEQPTEFA KKHRFKDTLA LFLVFLSFNH FTSLCLLVSF  60
   61 IVATKCKDFL ANCFIILFLS KKPSRHIGEV AHIDISTSKV TNGSSNRKSN SRFFGNSKNS 120
  121 FVIPIPVLIC EILFAMLLKI YGGDYFVKPI KNLAISIIAS FLINDPSDCL SYATSCSVLY 180
  181 AVSTNTFQRV SHFFDIIQLF DMSLRGTGQS IKLFTVFRKY SQFFKKLFSL FLPMPFKMLG 240
  241 KHSDSMIYYL SFHILFFSFA SSLLHPHRQT AENKPLKKGF NSTKPDVARV QGLQKMRISS 300
  301 SSSVSADSNT LEDQSPMIPN DPGGLSSSNQ TIHPSQQNNS PVPLSSHSNI LNPAASYPTD 360
  361 ATSSFPYFTS MVKEYKSYQP SVISAEGSNS QAVTTTTSTT TSPTTFNFSG DNTSLSNEIS 420
  421 LSDSSNGNSK KDSDFFSPSN DKYTNQLFEL NVDFGNMFSS SKLSSDISVT SNLENFIRLL 480
  481 FRRKNQHLIA PLWSMVVTLK TTNFEKKYLQ ETSENSLTPT NSNTSYVSNQ EKHDKDLDTI 540
  541 NTHSVSSRIS FTHAGKFKKS VFNNFEPSNT MALIAKTTSD DYNLLNLVST NENIFNRNDN 600
  601 DYKVCIIDIS TNSITFHIEN LHDGELIVLV NGVIWSEVSC ALILEHVGEE YVVVNGLVPS 660
  661 CSYDIQFINR LNHRDDYLVS DLIVRTCGNN NAIAGKFENL DFSFPSYYHR KFLSPLLTLK 720
  721 HSVLTTNANL SDERTKLKKT KKEFSKKLSL LRQEIDYFKG RISQNATHDE KSTLKVENLK 780
  781 VALQQSETAV NKLEMQLKTL TEKELELEEE YLKKKDLHLK NQLEFSKLEE SLSKDLKNSE 840
  841 GRFQKVNQEL VQLGSKLDKL NARNEKLQKE VDQNAEEIEK FSTQFLSKRE KDRFRRKEYR 900
  901 IREANKFELT IKGLEQDINR LENENENIHS LIGNSY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle