YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MTL1
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.96
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASCNPTRKK SSASSLSMWR TILMALTTLP LSVLSQELVP ANSTTSSTAP SITSLSAVES  60
   61 FTSSTDATSS ASLSTPSIAS VSFTSFPQSS SLLTLSSTLS SELSSSSMQV SSSSTSSSSS 120
  121 EVTSSSSSSS ISPSSSSSTI ISSSSSLPTF TVASTSSTVA SSTLSTSSSL VISTSSSTFT 180
  181 FSSESSSSLI SSSISTSVST SSVYVPSSST SSPPSSSSEL TSSSYSSSSS SSTLFSYSSS 240
  241 FSSSSSSSSS SSSSSSSSSS SSSSYFTLST SSSSSIYSSS SYPSFSSSSS SNPTSSITST 300
  301 SASSSITPAS EYSNLAKTIT SIIEGQTILS NYYTTITYSP TASASSGKNS HHSGLSKKNR 360
  361 NIIIGCVVGI GAPLILILLI LIYMFCVQPK KTDFIDSDGK IVTAYRSNIF TKIWYFLLGK 420
  421 KIGETERFSS DSPIGSNNIQ NFGDIDPEDI LNNDNPYTPK HTNVEGYDDD DDDDANDENL 480
  481 SSNFHNRGID DQYSPTKSAS YSMSNSNSQD YNDADEVMHD ENIHRVYDDS EASIDENYYT 540
  541 KPNNGLNITN Y

Type	Start	End	Confidence
Signal Peptide	1	35	0.98
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	361	0.77
Transmembrane Helix	362	385	0.92
Cytoplasmic	386	551	0.47