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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SHE10
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKLIKLITT LTVLVSLLQY CCEFNSGSIS CERTQTLCHY TNPRVWNTYF SRNCELYKNK  60
   61 VSPGFDIVAR KYDTAVKPVI DDATVKVNKV AIQPAFKVIH SQCKKWNCGK YYQLVRSPMV 120
  121 KTRRFFFAKY NAFVKPNLDK FFTAEFRSHL KERILKYKNI GHYYFTITSR CIKSKYDFIV 180
  181 GNTEEKLMGK FKNKDTHGIH GSVTREPSSE DMVLTVSTME SDEEELTTTS TQTVVETITL 240
  241 DQEEASAVAN HAHDDEASTD VEGSTDVNVN EQALLQEDFD MWSETILQKT QDVIQLFEKD 300
  301 VSKYINGKLV EEANHFKAKF QSLDDKSKKF FSKISLAIND IECVEGIDSE TGKKIFFDKS 360
  361 GSTEISQYIT RELVREYFNE TRSTLDELTN AMEKDLSEIT DEIEKKVNAI REENVEVFEE 420
  421 WGDIIVNEWS KRMAYVDVIN AHMGADDDTT LDEEKAKSSV NWKKFLKGKK QIIESRDKLA 480
  481 HHSADLSRVN AFRQKVQKKI LSFTQESGEF LYILRSKANL QFQERERKER ERKEREKAAA 540
  541 EEFQRQQELL RQQEEEDEED VSYTSTSTIT TTITMTL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle