YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|111494071
Protein type:	Transmembrane
Type Confidence:	0.70
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RWHSCVRGAE HEGYQRPNGL RLCVLSCLFV LHIFTRVAGN MASPSHFGVA STEVHRNRHP  60
   61 KRRNPHFRPP VESRTDDDGM RLMLSLYRIA ADADGRPKQH KIFGSNTIRL LQASTTEKHF 120
  121 LPTSSDLQYT YTVKYELNDL LLDKLVKASF MHLRSPMSSR LPYICEASVT SLQNPLEGDR 180
  181 ITMGPRSRWT ETDVTDHVSE SKDGHVSFFA RYWCTKPEHK RSVAHRKRFP PQHHLRAPLL 240
  241 LLFLEENKHP VEWGKSFPPL SRPRTRRSKK SGSIVSDIPN FKQGLSRVTK NNCKLYSSSV 300
  301 DFKDLGWDHW VIAPHKYNPG YCMGDCPRIL HYGYNSPNHA IMQTFISELG VADIPLPSCV 360
  361 PYKYKRMSML VMGSNGQIDY KEYEDMIADS CTCR

Type	Start	End	Confidence
Cytoplasmic	1	18	0.66
Transmembrane Helix	19	38	0.64
Non-Cytoplasmic	39	394	0.98