YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPI10
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	16	0.91
Transmembrane Helix	17	36	0.85
Non-Cytoplasmic	37	86	0.69
Transmembrane Helix	87	108	0.85
Cytoplasmic	109	188	0.71
Transmembrane Helix	189	209	0.69
Non-Cytoplasmic	210	251	0.70
Transmembrane Helix	252	271	0.82
Cytoplasmic	272	284	0.78
Transmembrane Helix	285	304	0.90
Non-Cytoplasmic	305	335	0.94
Transmembrane Helix	336	359	0.89
Cytoplasmic	360	371	0.82
Transmembrane Helix	372	389	0.93
Non-Cytoplasmic	390	395	0.81
Transmembrane Helix	396	415	0.92
Cytoplasmic	416	427	0.79
Transmembrane Helix	428	448	0.88
Non-Cytoplasmic	449	616	0.97

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHEVHRIKP KLGRTQIFWV FLAFRVLNAV LTRTFFQADE FWQALEPAHW KAFKYGELTW  60
   61 EWKFGVRSYL FPMIFELTYR LVSLSSILLH YALLLLSTIG SDLLILLLPK YELSWQVAED 120
  121 LKRLPFDVTR SFEYYGVIYA PKIVMAVLAS IGEYYIVRFV QKLYLLTLDK RNEKEEEERR 180
  181 SGLSEITKFA LLLSLTNFFN CFFITRTFIN SFEMILTSIA LYYWDWTGGQ MIKESSFTKS 240
  241 LIFAFLACLQ RPSSGLIWVI PSISLILNLV GKKQYHLLFI TFSKVLRSFF LVFTANAIID 300
  301 MYFYEKVTFP FFRFLKFNFT TPLSKFYGVA PWHFHFFQSL PIVLGASIPA FAFGLFFPLS 360
  361 KRSFPKKYLN PFFQVKLTIL LNLLVYSTLP HKEFRFIFPL QPLFILISSF GLLRLDRDYW 420
  421 KRLSGLKSLL WLVPFVSVFI ALLLDTFHES GSIEVMKFLH EEPEIDSLGF IMPCHSTPGQ 480
  481 SYLHRSDIQD LWSITCNPPL HLLGDPEAYS KLETYMDESD HLYDDISAFI YKNFPPPFRK 540
  541 DLRSPGKTYS HEWPTYLVVF EHMENAFLKD FLKDSSYIEY NRFFNSLAHW DSRRSGDIII 600
  601 YYKLPFDYSD IPAADI