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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YGL140C
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKSKLTKI QKLWLYYFPC DRILAKRICK STVNTTVAFI FCLIPKITAH LGAAPAMLPM  60
   61 ISVIVHPGRR VGGTIHGAIY CITGLIFGLA YAIFGRFLAQ RCLGSSWHEL TEAQQHVLHY 120
  121 KRYEAGLAIL AVFEVIMLFF HGWMRSVSHY YFGIVFPLFV VVHFAFMDPL NETAGTIAKA 180
  181 YSTPFYLGIA MSIFWNLVLF PEWGTTYLGN TTIDAMNELH KSIDYSINFF IAVDPHNSSQ 240
  241 LYSRDPVSLG KLLKMKSLIS SKVNNCRVVL HECIYEFTYA YVSPTKLKPI ISTLENLTVF 300
  301 INGLVNTCQL EFILLARHDN KLRPDDVAAL TLPKNKEISF ANAEKLLKVI DKLHPVIYSL 360
  361 HRTMSECMYI AKLVLAHAFD VKVSRVHSCS MFKDGNFPTF SNNANNLPND VDIQNKINDL 420
  421 KQALEECKAK FKSEMLSFDI DIMSPSDEMF LLSSFLLNFR QTADSTLVIM ESVKDILVKR 480
  481 QIQEKKGWLR GKRLWFLVLT NYETFSIWLK GDRNSVTEND TLKGTFNGNT NGFAHDTVIR 540
  541 RPDYEENELL SQKVSSNKNI VKDDASLDLP MTSEPKGNSS STSDTSSSPL TLTKTTTFGT 600
  601 NRTSRRQGRF SFMSMLISID KFCEVSHPHF RFGFQVAIAL MLASFPMFIP KTRQWYIDYR 660
  661 GTWIGFVCIL CLEPSVGGTF WVFFLRAVGV IFGAAWGYLS YVAAVNQTNP YLETVITVFG 720
  721 AIPGFYYLLG TPYVKAAIIE IISIYIVMLA AILPSQDDIL TSFAKRCLAV GYGGGVALIV 780
  781 QVFFFPLKAR EQLNEEISFV CGCISEMELL YATGLEGEQV ASSMSEEKYK KIEKISKSAK 840
  841 EALARATAYK GLTRQEPRLK GEYTELENVF TQVIFIQKQI IERIDTISLL RKQNGSAVIE 900
  901 EFNSVVYPYR RQMVGSISCL MRALQEAFIN KTPLPQFLPS ARIAHRRLIN KVRQTLRIRY 960
  961 PGQISNLSDK ARKPNEGDYA DGKDEDDDDN EGLVMKMNRR GQANTTANPH EYVLKEKFLS1020
 1021 WNASSAASEE IIEYIEELLN LTKILVGVNE FKYGFLSRPL YEDWAAEAVT GFDNFINGKS1080
 1081 NPMNTRRNRT PFDGTSIISE GNESLQSTNS NESQISPDST RSYEPECPVA YEKNDNPAAL1140
 1141 NLLRIASHKA GQNADGLPKT FRNRAFSITS TSGQLSSLSR HSTLGNADPN YLNDDDESSD1200
 1201 DDLPLALKMV LSHMKEKKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle