YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YFL006W
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARGPNKVLL VPYLVDYVLP FLIGLVKHKD VCALASLDPV RLYAGLGYMP IRKNHVAAIV  60
   61 DYVCSSNVAL SSNQTKLQLA FIQHFLSAEL LQLTEEEKNK ILEFVVSNLY NEQFVEVRVR 120
  121 AASILSDIVH NWKEEQPLLS LIERFAKGLD VNKYTSKERQ KLSKTDIKIH GNVLGLGAII 180
  181 SAFPYVFPLP PWIPKQLSNL SSWARTSGMT GQAAKNTISE FKKVRADTWK FDRASFNTEE 240
  241 LEDLEGVLWR SYYA

Type	Start	End	Confidence
Cytoplasmic	1	168	0.78
Transmembrane Helix	169	189	0.76
Non-Cytoplasmic	190	254	0.95