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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VTC2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFGVKLANE VYPPWKGSYI NYEGLKKFLK EDSVKDGSND KKARWDDSDE SKFVEELDKE  60
   61 LEKVYGFQLK KYNNLMERLS HLEKQTDTEA AIKALDADAF QRVLEELLSE STELDNFKRL 120
  121 NFTGFAKIVK KHDKLYPKYP SVKSLLEVRL KELPSHSEEY SPLLYRISFL YNILRSNFNT 180
  181 ASEPLASASK FSSIVSNDID MNFRSFKFWV HNDNLMEVKT RILRHLPVLV YANVPSENDD 240
  241 LVNRFESDIS NNDEIVGSSS STSSVEHGLG ARSFDPLINT LYFDNEHFEL YNDKLLKLNS 300
  301 APTLRLRWTG QLSDKPDIFL EKKTLIEDEA TGKSEFDLTK LQLKQKFING FIFEGDKKFK 360
  361 EQTLKKLKES GTAGRDLERL EEDFSEIQNF IIKNELQPVF RTVYTRTAFQ IPGDDKIRVT 420
  421 IDSNIVFIKE DSFDRERPIR DPNTWHRTDI DANVANPLKF LRGGEYAKFP YSVMEIKVKS 480
  481 SLDSSMSASS MISNVKLPKK HGQWLNDLTN SHLVKEIPKF SIFVQGVASL YGDDEKLDIL 540
  541 PFWLPDLETD IRQDPKQAYE EEKKKLLKQK EIQKKIDGMR RLSNLKEPQH QAAVPVSQEE 600
  601 NERITSQGDL EADGSSDEET EQEPHSKRSK KVRRRKPKAT FLRILAGRDP KLMGVDSEEE 660
  661 EIELPPGVKK PLNLLKNAGP VNVEAKVWLA NERTFNRWLS VTSLLSVLTF SIYNSVKKAE 720
  721 YPTLANYMAY VYFGLTIFCA LWSYSIYMKR VDIIQQRSGQ HLDAPLGPVL VSIVLFVTLV 780
  781 VNFVMAFRNA AKSRQELQIQ NLEVPERIPE VLRPLQNYLF KLMGPSSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle