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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SAK1
Protein type: Transmembrane
Type Confidence: 0.72
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRSDKKVNV EEVNVPSNLQ IELEKSGTSS SVSLRSPTKS SATNLAGMAE GARDNASIAS  60
   61 SSVDSLNMLL ERQRVRQLNH PQHQQHISSS LAKTPTTTSS FCSSGSSKNK VKETNRISLT 120
  121 YDPVSKRKVL NTYEIIKELG HGQHGKVKLA RDILSKQLVA IKIVDRHEKK QRKFFTFIKS 180
  181 SKISENDKIK REIAIMKKCH HKHVVQLIEV LDDLKSRKIY LVLEYCSRGE VKWCPPDCME 240
  241 SDAKGPSLLS FQETREILRG VVLGLEYLHY QGIIHRDIKP ANLLISGDGT VKISDFGVSL 300
  301 AASSTNSSDS SESLDELELA KTVGTPAFFA PEMCLGEDAF TRYNLTKENL FRGSCISFMI 360
  361 DIWAVGVTLY CLLFGMLPFF SDFELKLFEK IVNDPLKFPT FKEIQSNKVS KVSCEEEYEM 420
  421 AKDLLLKLLE KNPQKRMTIP AIKKHPFVSW DFDHVPENDE KLLSSVLEQK LRFQCNQTDQ 480
  481 FEPISISKHE LKNAVSGVGK KIKESVLKSI PLKDPSDLSN KNYLHPTETT RGRGDANVIV 540
  541 SEGSVLSNIK ELSANDGCLN TDSDTNININ DDDHYSGDDN DGHLTKRELE RELNKFDDKH 600
  601 EAGNMVNLPI NSSFASLDSF YIDNFAMARM GMSSPEAGDS VSSVPNLPSA PSSTRLGRSP 660
  661 VFSGVTNQPS PIRPVLPQQK SSFCATGRYD KSHNSLLRNS SSHLTSYNSG RPSSRTGRMN 720
  721 SRNQNLPKIP NSLSKISTTK LTELRVPKDS EIPSPAKNPN ADRLRRFPVK KNTKTPAIKD 780
  781 PPRININSSD KSGSKNSPIK SLYQRMKQSK DNSKTFEVRR GNFFSHFNGD DDDSSSQSSV 840
  841 TSSGSESDSE LSSTSSSCTS GTQSRNSSNN NAYSETESLP FEFGVDSEDG SGVLLRDLPN 900
  901 EDQIRPFLDI QPCRRMKVKS SLNLEPPSVS SSSSSSSDED ELILNVGTAG HRRRHNSSKL 960
  961 SELSNSPQKG SNNFMYSNGS VHDSETTITP QNMDDLTLHQ ALSRSQPISK PGPLVLPKRL1020
 1021 DQKKATTETS NLTDIVEFNG NNDHRKDKNF DKVLYSRDLL KDALSSTNAG RRRSIPSNKI1080
 1081 RGRKDASITM STNVGNDEHA RNTSCHGDKG QENGAIKQRT HERSRSLTVA ELNEEKRRSA1140
 1141 LP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle