YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GTT3
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTKSTFSRW KKADLIDLAN KLEIDGFPNY AKKSDMIDYL ESHLNHLEKP VDFKDDYPEL  60
   61 RSFYESMTVD QSKDERNEYG SGSGNGSGSG SCDTATNDSD LEKAYIKEDD DEKPQSGDET 120
  121 SATKPLSSRN ANSNAKTNFN LLDFSTDNDS STSAFTKFKF NFQEYLSDIR YQTQKLNENV 180
  181 QDYLSTISAV DTIFSLLEFS FLVRNILAAG QPTSSSSLAS SLEAAVAAHN KYQYTLDFCL 240
  241 PILTWLLFFR GIPTLVSYYI NFIRYDLNIE LDPMTFNLTK FLISLAIFKT CNNKNIDFHS 300
  301 FRCVNQLWTQ LCTVNRSLGM VPLVFSMVSC LLTLYVL

Type	Start	End	Confidence
Non-Cytoplasmic	1	316	0.58
Transmembrane Helix	317	336	0.69
Cytoplasmic	337	337	0.43