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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YSP2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDEATRKKR SFSDGHFFKK LKLMSRKKQP VMERSKTTRT RKESTNSAAK SSLSLRRANN  60
   61 GRKTIAKRRV LTDIGSTNEG VAGNSGSNSP AQYSHTPHFS DSIPPLPLEL PDIVSIRSSR 120
  121 SHISNKSNKN KHGIDLTFIP RRSLQNSKAG LKKPNTSPQG YFNIPVTIDR ASEKVKHTDT 180
  181 KNTFNSSSSE NERPVLSILQ KDDSQSSSHP AIDSMSAPNN INNNNDIENS SNSLFDTILS 240
  241 IAHSAISHVP KISALNTEIQ REFSHSGESH TGSTRHPYFH IHHAQQQHPL SQQQGPLPVS 300
  301 ENANQNPNDT VLIHSPSANT AHRSSSFLRH LDYLLSPTSG PASDKHTQVE EGDDEEELSP 360
  361 LSKAFLSPST QLVPTNTSTT PLSGSLTPNN RNVNANSNSE TENDNDRDDR SNVGKVKFQP 420
  421 LKVHEPAIST FGKGNLTLEA VAGSSDIDNT TIDLDENNTN NNPNASSTNL SHISKSNVNN 480
  481 NLGPKELNTS YRNSTYIDMA RFENSQSNLS SHRARSKTLP ANKALENAVG DEGNSKRNSR 540
  541 YSSYSNDMAF DDADERKFRS MSKKFLNRRS FSPSNLGNKV IPGINLRNSF NKNRNSSSDF 600
  601 FSTNQGQQMP RTSTAGSGNI HAIMGLDSGN DDFKLEGIEY ASEKKNSEFH TLFKDCDINP 660
  661 NEKLIVDHSC ALSRDILLQG RMYISDAHIG FFSNILGWVS TVFIPFKEIV QIEKKTTAGI 720
  721 FPNGIVIDTL HTKYIFASFM SRDATFDLIT DVWNQIILGK KYRNGFGNND DGTISDSSSA 780
  781 FFDDSDDNDD DGDLDDDDPD INSTDMTSSD DIDADVFNES NDLGKNQKST NYLLGPNKHS 840
  841 PTTADFKPSN NDHLVIEANI NAPLGKVVNL LYGEDVSYYE RILKAQKNFE ISPIPNNFLT 900
  901 KKIRDYAYTK PLSGSIGPSK TKCLITDTLE HYDLEDYVKV LSITKNPDVP SGNIFSVKTV 960
  961 FLFSWDKNNS TKLTVYNSVD WTGKSWIKSM IEKGTFDGVA DTTKIMISEI KKILSDEDSN1020
 1021 INSKHQASNN ESEEEIINLP TIGPPVHDPT EPDFQKGKDD TVIDEKINIP VPLGTVFSLL1080
 1081 YGDDTSYIKK IIENQNNFNV CDIPKFVNNA REITYTKKLN NSFGPKQTKC IVTETIEHMD1140
 1141 LNSFFMVKQI VRSPDVPYGS SFSVHTRFFY SWGDHNTTNM KVVTNVVWTG KSMLKGTIEK1200
 1201 GSIDGQRSST KQLVDDLKKI ISNASSTKKK SRRRGKTVNK RKSSPSTIKN EKNEENFEDT1260
 1261 STKNSFFSAF SMLQQVNITS VQGIMTIISF FICLIFFFRL LFHSKNTSNI QIITPGTILI1320
 1321 NGNEYNYVPN FKTLYHVYED NIIKDARRKD SNKNNIVTDT EGLIWDWLID RGNGTVQNSV1380
 1381 LSNHIKESNN KKVKLVNGVS DHKIQQLVES IKITELQLQE MKELLAQTDN TSATNQLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle