YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRF1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLSAPVNST VRRKPHSPNK KKPKETGTAA SFSSSSSTVV LSSNNDGSFD ALWDPSISKA  60
   61 SDFESSYISA KRLKPESSNR QKKKNSYKYS REENTNEVEE KTSLGSSSKT EADNIFNDQL 120
  121 TSAGNTTYVS NKRDVNFGAN SAVVLLGLPT SKSESHRQYH SPSASTTNED EEDIGVDILV 180
  181 DNHIDSCETV SINNNRGITH QYPETESDVD FDEAVILTPM DGTDKGVKNP RPLEKKYSSS 240
  241 CFEDRTPLNL DDGHFSECNH FSTLDVSSFF HLNEHVHKID EVELDGPDRT FSLDNVAINT 300
  301 RKKDIDCLYN SSREDLSNLT CSSEGPRNDS YDSDYNIDEV TYRDDESTDE DESLPTPDRK 360
  361 RKKIGHKACE ILDSKRIGIK VPKLYVWSLS DKPFSVIDGL CTKSLYPLSD DINTPESLSS 420
  421 CSSSVSSREN QKGDATFDND AMIADLLNIG GLEVEKASNG HIELIGE

Type	Start	End	Confidence
Signal Peptide	1	42	0.73
N-region	1	33
H-region	34	39
C-region	40	42
Cleavage Site	42	43
Non-Cytoplasmic	43	467	0.99