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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MSS116
Protein type: Globular with Signal Peptide
Type Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTSILIKGR TPVLASRNLL AALSNCNHIT WAVSRRLYND GNRDQRNFGR NQRNNNSNRY  60
   61 RNSRFNSRPR TRSREDDDEV HFDKTTFSKL IHVPKEDNSK EVTLDSLLEE GVLDKEIHKA 120
  121 ITRMEFPGLT PVQQKTIKPI LSSEDHDVIA RAKTGTGKTF AFLIPIFQHL INTKFDSQYM 180
  181 VKAVIVAPTR DLALQIEAEV KKIHDMNYGL KKYACVSLVG GTDFRAAMNK MNKLRPNIVI 240
  241 ATPGRLIDVL EKYSNKFFRF VDYKVLDEAD RLLEIGFRDD LETISGILNE KNSKSADNIK 300
  301 TLLFSATLDD KVQKLANNIM NKKECLFLDT VDKNEPEAHE RIDQSVVISE KFANSIFAAV 360
  361 EHIKKQIKER DSNYKAIIFA PTVKFTSFLC SILKNEFKKD LPILEFHGKI TQNKRTSLVK 420
  421 RFKKDESGIL VCTDVGARGM DFPNVHEVLQ IGVPSELANY IHRIGRTARS GKEGSSVLFI 480
  481 CKDELPFVRE LEDAKNIVIA KQEKYEPSEE IKSEVLEAVT EEPEDISDIV ISLISSYRSC 540
  541 IKEYRFSERR ILPEIASTYG VLLNDPQLKI PVSRRFLDKL GLSRSPIGKA MFEIRDYSSR 600
  601 DGNNKSYDYD DDSEISFRGN KNYNNRSQNR DYDDEPFRRS NNNRRSFSRS NDKNNYSSRN 660
  661 SNIY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle