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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SHS1
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTASTPPIN LFRRKKEHKR GITYTMLLCG PAGTGKTAFA NNLLETKIFP HKYQYGKSNA  60
   61 SISSNPEVKV IAPTKVVSFN SKNGIPSYVS EFDPMRANLE PGITITSTSL ELGGNKDQGK 120
  121 PEMNEDDTVF FNLIMTHGIG ENLDDSLCSE EVMSYLEQQF DIVLAEETRI KRNPRFEDTR 180
  181 VHVALYFIEP TGHGLREVDV ELMKSISKYT NVLPIITRAD SFTKEELTQF RKNIMFDVER 240
  241 YNVPIYKFEV DPEDDDLESM EENQALASLQ PFAIITSDTR DSEGRYVREY PWGIISIDDD 300
  301 KISDLKVLKN VLFGSHLQEF KDTTQNLLYE NYRSEKLSSV ANAEEIGPNS TKRQSNAPSL 360
  361 SNFASLISTG QFNSSQTLAN NLRADTPRNQ VSGNFKENEY EDNGEHDSAE NEQEMSPVRQ 420
  421 LGREIKQENE NLIRSIKTES SPKFLNSPDL PERTKLRNIS ETVPYVLRHE RILARQQKLE 480
  481 ELEAQSAKEL QKRIQELERK AHELKLREKL INQNKLNGSS SSINSLQQST RSQIKKNDTY 540
  541 TDLASIASGR D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle