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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110800402, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKERKGGMG GQMGRMGGGP RAVEKAKDFK GTMKKLGVYL KPYSLSIAIV ILFAIGSAAF  60
   61 SIVGPKILGK ATTKIFEGLV QKITGVPNAS IDFGYIGNIA MILVALYLVS SLFGIIQSFI 120
  121 MSGVAQKVSY NLRKQISEKM DTLPLNYFDT RTNGEVLSRI TNDVDTVNQT LNQSLSQIIT 180
  181 SVVTLIGVLI MMFSISWIMT LATFIILPVS MVLISLVVKK SQKYFKSQQE YLGHLNGQVE 240
  241 EVYGGHNIMK AFNREEASTK DFDELNNTLY KSAWKSQFLS GMMMPIMSFV GNLGYVLVSI 300
  301 LGGWLTIKSV ITVGDIQAFI QYVRSFNQPI SQMAQVANIM QSTAAAAERV FEFLDEEDEV 360
  361 KDPVNSVDPS EIRGEVEFED VHFGYNEDKI IINDFSVDVK PGQKVAIVGP TGAGKTTIVK 420
  421 LLMRFYDINS GSIKIDGHDI RDFKRADLRN LFGMVLQDTW LFNGTIMENL RYGRLDATDA 480
  481 EVKEAAKAAH VDHFVKTLPD GYNMVLNEEA SNISQGQKQL LTIARAFLKD PKLLILDEAT 540
  541 SSVDTRTELL IQKAMEKLME GRTSFIIAHR LSTIRDADLI LVMKDGDIVE QGNHEELLEK 600
  601 GGFYSSLYNS QFEQSSAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle