YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATG22
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	26	0.92
Transmembrane Helix	27	50	0.63
Non-Cytoplasmic	51	95	0.72
Transmembrane Helix	96	119	0.87
Cytoplasmic	120	130	0.56
Transmembrane Helix	131	149	0.92
Non-Cytoplasmic	150	156	0.61
Transmembrane Helix	157	179	0.80
Cytoplasmic	180	211	0.60
Transmembrane Helix	212	232	0.74
Non-Cytoplasmic	233	239	0.42
Transmembrane Helix	240	262	0.82
Cytoplasmic	263	318	0.49
Transmembrane Helix	319	343	0.82
Non-Cytoplasmic	344	351	0.47
Transmembrane Helix	352	377	0.83
Cytoplasmic	378	388	0.47
Transmembrane Helix	389	412	0.88
Non-Cytoplasmic	413	421	0.45
Transmembrane Helix	422	443	0.90
Cytoplasmic	444	453	0.46
Transmembrane Helix	454	474	0.51
Non-Cytoplasmic	475	484	0.75
Transmembrane Helix	485	504	0.92
Cytoplasmic	505	528	0.91

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYGTINDMN ESVTNYRIKK AQNNIKGWYA YSFSSEPFVV SAVSTYIPLL LQQFASINGV  60
   61 KVHDHSIPCL SETGSDSDKC VLGLFNNRIF VDTSSFALYV FSLSVLFQTI IVISVSGIVD 120
  121 LWGSVKFKGR ILVWFGIVGA LSTVAISKLN DTQIYSLAGL YIVANGCFGV INVVGNSLLP 180
  181 IFVKDSLKCQ SQGAYEPDKV DSLTTVISGR GASLGYSSAL IVQIVSMFLV ASKKGSKQDV 240
  241 QVAVLFVGIW WFVWQLPMIW LIDDVTIPIR VDDSTLASAR SPYPGEQDAL GQLNWKNYLS 300
  301 YGWVSLFESF KHARLLKDVM IFLIAWFIIS DSITTINSTA VLFSKAELHM STLNLIMISV 360
  361 LTVVNAMLGA FMIPQFLATK FRWTSSQTLM YIIIWASFIP FYGILGFFFN AFGLKHKFEM 420
  421 FLLAIWYGLS LGGLSAVSRS VFSLIVPPGK ESTFFSMFSI TDKGSSILGP FLVGLLTDKT 480
  481 HNIRYSFYFF FLLLMLSLPV LNCLDVKRGR REAEELSQVL PESERRLD