YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YBR287W
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVETFSFAHL AYLVFESVLQ VVIIALAGFW SASSGLLPKQ SQKIISLLNV DLFTPCLIFS  60
   61 KLAKSLSMAK IFEIAIIPIF FGLTTGISFI SGKIMSRILD LDKDETNFVV ANSVFGNSNS 120
  121 LPVSLTLSLA YTLPNLTWDQ IPNDNRDNVA SRGILYLLIF QQIGQMLRWS WGYNKLMKWS 180
  181 GENTQHMPPS QVQSLLERTP NIDNEELVNE EQEEQELLEE ENNRMNSSFL SSSSIGDKIW 240
  241 QKSCTVFERI RANLNPPLYS MIFAVVVAAI GPLQRELFME DGFINNTFAE AVTQLGSVSI 300
  301 PLILVVLGSN LYPSAEVFPK TVHHSKLLIG SIIGRMILPS CFLLPIIAIA VKYINVSILD 360
  361 DPIFLVVGFL LTVSPPAIQL TQITQLNEFF EAEMADILFW GYAVLSLPVS IIVVSGAIYV 420
  421 LQWANPT

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.52
Transmembrane Helix	8	32	0.83
Cytoplasmic	33	43	0.45
Transmembrane Helix	44	63	0.51
Non-Cytoplasmic	64	70	0.69
Transmembrane Helix	71	92	0.88
Cytoplasmic	93	256	0.77
Transmembrane Helix	257	274	0.92
Non-Cytoplasmic	275	290	0.86
Transmembrane Helix	291	312	0.88
Cytoplasmic	313	331	0.82
Transmembrane Helix	332	351	0.94
Non-Cytoplasmic	352	361	0.72
Transmembrane Helix	362	383	0.83
Cytoplasmic	384	397	0.83
Transmembrane Helix	398	421	0.93
Non-Cytoplasmic	422	427	0.83