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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: APE3
Protein type: Transmembrane
Type Confidence: 0.55
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTKPCSAFQ QLVEEAKKKK KTETPTMHFS LKQLAVAAFY ATNLGSAYVI PQFFQEAFQQ  60
   61 EEPIENYLPQ LNDDDSSAVA ANIPKPHIPY FMKPHVESEK LQDKIKVDDL NATAWDLYRL 120
  121 ANYSTPDYGH PTRVIGSKGH NKTMEYILNV FDDMQDYYDV SLQEFEALSG KIISFNLSDA 180
  181 ETGKSFANTT AFALSPPVDG FVGKLVEIPN LGCEEKDYAS VVPPRHNEKQ IALIERGKCP 240
  241 FGDKSNLAGK FGFTAVVIYD NEPKSKEGLH GTLGEPTKHT VATVGVPYKV GKKLIANIAL 300
  301 NIDYSLYFAM DSYVEFIKTQ NIIADTKHGD PDNIVALGAH SDSVEEGPGI NDDGSGTISL 360
  361 LNVAKQLTHF KINNKVRFAW WAAEEEGLLG SNFYAYNLTK EENSKIRVFM DYDMMASPNY 420
  421 EYEIYDANNK ENPKGSEELK NLYVDYYKAH HLNYTLVPFD GRSDYVGFIN NGIPAGGIAT 480
  481 GAEKNNVNNG KVLDRCYHQL CDDVSNLSWD AFITNTKLIA HSVATYADSF EGFPKRETQK 540
  541 HKEVDILNAQ QPQFKYRADF LII

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle