YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ALG7
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	20	0.53
Transmembrane Helix	21	43	0.81
Non-Cytoplasmic	44	71	0.52
Transmembrane Helix	72	96	0.82
Cytoplasmic	97	128	0.51
Transmembrane Helix	129	145	0.48
Non-Cytoplasmic	146	156	0.46
Transmembrane Helix	157	182	0.81
Cytoplasmic	183	197	0.49
Transmembrane Helix	198	220	0.85
Non-Cytoplasmic	221	226	0.42
Transmembrane Helix	227	248	0.85
Cytoplasmic	249	255	0.51
Transmembrane Helix	256	276	0.90
Non-Cytoplasmic	277	284	0.49
Transmembrane Helix	285	307	0.84
Cytoplasmic	308	415	0.77
Transmembrane Helix	416	439	0.79
Non-Cytoplasmic	440	448	0.85

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRLFSLALI TCLIYYSKNQ GPSALVAAVG FGIAGYLATD MLIPRVGKSF IKIGLFGKDL  60
   61 SKPGRPVLPE TIGAIPAAVY LFVMFIYIPF IFYKYMVITT SGGGHRDVSV VEDNGMNSNI 120
  121 FPHDKLSEYL SAILCLESTV LLGIADDLFD LRWRHKFFLP AIAAIPLLMV YYVDFGVTHV 180
  181 LIPGFMERWL KKTSVDLGLW YYVYMASMAI FCPNSINILA GVNGLEVGQC IVLAILALLN 240
  241 DLLYFSMGPL ATRDSHRFSA VLIIPFLGVS LALWKWNRWP ATVFVGDTYC YFAGMVFAVV 300
  301 GILGHFSKTM LLLFIPQIVN FIYSCPQLFK LVPCPRHRLP KFNEKDGLMY PSRANLKEEP 360
  361 PKSIFKPILK LLYCLHLIDL EFDENNEIIS TSNMTLINLT LVWFGPMRED KLCNTILKLQ 420
  421 FCIGILALLG RHAIGAIIFG HDNLWTVR