YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YBR241C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	18	0.98
Transmembrane Helix	19	41	0.91
Non-Cytoplasmic	42	86	0.96
Transmembrane Helix	87	106	0.92
Cytoplasmic	107	115	0.81
Transmembrane Helix	116	135	0.95
Non-Cytoplasmic	136	141	0.80
Transmembrane Helix	142	163	0.93
Cytoplasmic	164	175	0.79
Transmembrane Helix	176	195	0.89
Non-Cytoplasmic	196	202	0.80
Transmembrane Helix	203	222	0.93
Cytoplasmic	223	298	0.97
Transmembrane Helix	299	320	0.88
Non-Cytoplasmic	321	331	0.81
Transmembrane Helix	332	353	0.89
Cytoplasmic	354	360	0.81
Transmembrane Helix	361	384	0.86
Non-Cytoplasmic	385	390	0.64
Transmembrane Helix	391	412	0.90
Cytoplasmic	413	421	0.80
Transmembrane Helix	422	442	0.89
Non-Cytoplasmic	443	448	0.71
Transmembrane Helix	449	469	0.93
Cytoplasmic	470	488	0.96

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAETERLMPN GGSRETKPLI TGHLILGTIV ACLGSIQYGY HIAELNAPQE FLSCSRFEAP  60
   61 DENISYDDTW VGQHGLKQCI ALTDSQYGAI TSIFSIGGLF GSYYAGNWAN RYGRKYVSMG 120
  121 ASAMCMVSSL LLFFSNSYLQ LLFGRFLVGM SCGTAIVITP LFINEIAPVE WRGAMGSMNQ 180
  181 VSINLGILLT QTLALKYADS YNWRWLLFSG SVIAVANILA WLKVDESPRW LVSHGFVSEA 240
  241 ETALFKLRPG TYQQAKQEIQ DWQRSHGHNR DPESSEETHS GPTLWQYVTD PSYKKPRTVI 300
  301 LAILSCQQFC GINSIIFYGV KVIGKILPDY SIQVNFAISI LNVVVTLAAS AIIDHVGRRP 360
  361 LLLASTTVMT AMSLLISVGL TLSVSFLLVT ATFVYIAAFA IGLGPIPFLI IGELSYPQDA 420
  421 ATAQSFGTVC NWLATFIVGY LFPIGHGLMG GYVFAIFAAI AAMFATYVYK RVPETKGKTT 480
  481 YSEVWAGY