YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FUR4
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	115	0.96
Transmembrane Helix	116	134	0.89
Non-Cytoplasmic	135	146	0.74
Transmembrane Helix	147	168	0.87
Cytoplasmic	169	182	0.76
Transmembrane Helix	183	205	0.81
Non-Cytoplasmic	206	239	0.90
Transmembrane Helix	240	260	0.94
Cytoplasmic	261	267	0.90
Transmembrane Helix	268	288	0.94
Non-Cytoplasmic	289	308	0.91
Transmembrane Helix	309	330	0.88
Cytoplasmic	331	349	0.82
Transmembrane Helix	350	372	0.92
Non-Cytoplasmic	373	399	0.94
Transmembrane Helix	400	421	0.88
Cytoplasmic	422	440	0.83
Transmembrane Helix	441	460	0.94
Non-Cytoplasmic	461	467	0.85
Transmembrane Helix	468	490	0.92
Cytoplasmic	491	520	0.90
Transmembrane Helix	521	538	0.92
Non-Cytoplasmic	539	558	0.79
Transmembrane Helix	559	579	0.82
Cytoplasmic	580	633	0.90

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDNLSLHLS GSSKRLNSRQ LMESSNETFA PNNVDLEKEY KSSQSNITTE VYEASSFEEK  60
   61 VSSEKPQYSS FWKKIYYEYV VVDKSILGVS ILDSFMYNQD LKPVEKERRV WSWYNYCYFW 120
  121 LAECFNINTW QIAATGLQLG LNWWQCWITI WIGYGFVGAF VVLASRVGSA YHLSFPISSR 180
  181 ASFGIFFSLW PVINRVVMAI VWYSVQAYIA ATPVSLMLKS IFGKDLQDKI PDHFGSPNAT 240
  241 TYEFMCFFIF WAASLPFLLV PPHKIRHLFT VKAVLVPFAS FGFLIWAIRR AHGRIALGSL 300
  301 TDVQPHGSAF SWAFLRSLMG CMANFSTMVI NAPDFSRFSK NPNSALWSQL VCIPFLFSIT 360
  361 CLIGILVTAA GYEIYGINYW SPLDVLEKFL QTTYNKGTRA GVFLISFVFA VAQLGTNISA 420
  421 NSLSCGTDMS AIFPKFINIK RGSLFCAAMA LCICPWNLMA TSSKFTMALS AYAIFLSSIA 480
  481 GVVCSDYFVV RRGYIKLTHI YSHQKGSFYM YGNRFGINWR ALAAYLCGVA PCLPGFIAEV 540
  541 GAPAIKVSDG AMKLYYLSYW VGYGLSFSSY TALCYFFPVP GCPVNNIIKD KGWFQRWANV 600
  601 DDFEEEWKDT IERDDLVDDN ISVYEHEHEK TFI