YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RCR1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLISYENEA INEVKKADNH HVSKFVTSYY GPSSSSWQSG IWILFVLFVA AVILIILFTF  60
   61 VANRRRRRMG RAPIRGTAWL TPPSYRQSQQ QYTGTVQQRT DDYVPEYTET ANEHDLGYYD 120
  121 QRGEFHPNDK AAYVAPPPLV QECSSESVNS LERPPAAVVH QANSLDTDYG LTRPSNGRVP 180
  181 AVSDTVEQLE RLPGGTTTQE INPPERAKVN ARS

Type	Start	End	Confidence
Non-Cytoplasmic	1	39	0.97
Transmembrane Helix	40	62	0.95
Cytoplasmic	63	213	0.98