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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|190408865
Protein type: Globular with Signal Peptide
Type Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYVVVSGGV ISGIGKGVLA SSTGMLMKTL GLKVTSIKID PYMNIDAGTM SPLEHGECFV  60
   61 LDDGGETDLD LGNYERYLGV TLTKDHNITT GKIYSHVIAK ERKGDYLGKT VQIVPHLTNA 120
  121 IQDWIERVAK IPVDDTGMEP DVCIIELGGT VGDIESAPFV EALRQFQFKV GKENFALIHV 180
  181 SLVPVIHGEQ KTKPTQAAIK GLRSLGLVPD MIACRCSETL DKPTIDKIAM FCHVGPEQVV 240
  241 NVHDVNSTYH VPLLLLEQKM IDYLHARLKL DEISLTEEEK QRGLELLSKW KATTGNFDES 300
  301 METVKIALVG KYTNLKDSYL SVIKALEHSS MKCRRKLDIK WVEATDLEPE AQESNKTKFH 360
  361 EAWNMVSTAD GILIPGGFGV RGTEGMVLAA RWARENHIPF LGVCLGLQIA TIEFTRSVLG 420
  421 RKDSHSAEFY PDIDEKNHVV VFMPEIDKET MGGSMRLGLR PTFFQNETEW SQIKKLYGDV 480
  481 SEVHERHRHR YEINPKMVDE LENNGLIFVG KDDTGKRCEI LELKNHPYYI ATQYHPEYTS 540
  541 KVLDPSKPFL GLVAASAGIL QDVIEGKYDL EAGENKFNF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle