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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FLO9
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.86
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLAHYCLLL AIVTLLGLTN VVSATTAACL PANSRKNGMN VNFYQYSLRD SSTYSNAAYM  60
   61 AYGYASKTKL GSVGGQTDIS IDYNIPCVSS SGTFPCPQED LYGNWGCKGI GACSNNPIIA 120
  121 YWSTDLFGFY TTPTNVTLEM TGYFLPPQTG SYTFKFATVD DSAILSVGGS IAFECCAQEQ 180
  181 PPITSTNFTI NGIKPWNGSP PDNITGTVYM YAGFYYPMKI VYSNAVAWGT LPISVTLPDG 240
  241 TTVSDDFEGY VYTFDNNLSQ PNCTIPDPSN YTVSTTITTT EPWTGTFTST STEMTTVTGT 300
  301 NGVPTDETVI VIRTPTTAST IITTTEPWNS TFTSTSTELT TVTGTNGVRT DETIIVIRTP 360
  361 TTATTAITTT EPWNSTFTST STELTTVTGT NGLPTDETII VIRTPTTATT AMTTTQPWND 420
  421 TFTSTSTELT TVTGTNGLPT DETIIVIRTP TTATTAMTTT QPWNDTFTST STELTTVTGT 480
  481 NGLPTDETII VIRTPTTATT AMTTTQPWND TFTSTSTEIT TVTGTNGLPT DETIIVIRTP 540
  541 TTATTAMTTT QPWNDTFTST STEMTTVTGT NGLPTDETII VIRTPTTATT AITTTEPWNS 600
  601 TFTSTSTEMT TVTGTNGLPT DETIIVIRTP TTATTAITTT QPWNDTFTST STEMTTVTGT 660
  661 NGLPTDETII VIRTPTTATT AMTTTQPWND TFTSTSTEIT TVTGTNGLPT DETIIVIRTP 720
  721 TTATTAMTTT QPWNDTFTST STEMTTVTGT NGVPTDETVI VIRTPTSEGL ISTTTEPWTG 780
  781 TFTSTSTEMT TVTGTNGQPT DETVIVIRTP TSEGLVTTTT EPWTGTFTST STEMTTITGT 840
  841 NGQPTDETVI IVKTPTTAIS SSLSSSSGQI TSFITSARPI ITPFYPSNGT SVISSSVISS 900
  901 SDTSSLVISS SVTSSLVTSS PVISSSFISS PVISSTTTSA SILSESSKSS VIPTSSSTSG 960
  961 SSESETGSAS SASSSSSISS ESPKSTYSSS SLPPVTSATT SQEITSSLPP VTTTKTSEQT1020
 1021 TLVTVTSCES HVCTESISSA IVSTATVTVS GATTEYTTWC PISTTEITKQ TTETTKQTKG1080
 1081 TTEQTTETTK QTTVVTISSC ESDVCSKTAS PAIVSTSTAT INGVTTEYTT WCPISTTESK1140
 1141 QQTTLVTVTS CGSGVCSETT SPAIVSTATA TVNDVVTVYS TWRPQTTNEQ SVSSKMNSAT1200
 1201 SETTTNTGAA ETTTSTGAAE TKTVVTSSIS RFNHAETQTA SATDVIGHSS SVVSVSETGN1260
 1261 TKSLTSSGLS TMSQQPRSTP ASSMVGSSTA SLEISTYAGS ANSLLAGSGL SVFIASLLLA1320
 1321 II

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle