YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BI2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFRKSNVYL SLVNSYIIDS PQPSSINYWW NMGSLLGLCL VIQIVTGIFM AMHYSSNIEL  60
   61 AFSSVEHIMR DVHNGYILRY LHANGASFFF MVMFMHMAKG LYYGSYRSPR VTLWNVGVII 120
  121 FILTIATAFL GYCCVYGQMS HWGNMNIASN MFNMMKTIYM MMLMLLIYIF YTIMMRQMMK 180
  181 TKEYTMLIKS MDYINKNKYM INLNMTNKKD MNNNIGPLNM NILSIIYGSM LGDGHAEKRK 240
  241 GGKGTRIVFQ QEYCNINYLY YLHSLLANLG YCNTNLPLIK TRLGKKGKIR QYLKFNTWTY 300
  301 DSFNMIYSEW YIKNMSGKGN IKVIPKSLDN YLTPLALAIW IMDDGCKLGK GLKFTTNCFS 360
  361 YKDVQYLTYL LHNKYNIKST ITKGNKENTQ FVIYVWKESM PILTKIVSPY IIPSMKYKLG 420
  421 NYL

Type	Start	End	Confidence
Cytoplasmic	1	29	0.93
Transmembrane Helix	30	53	0.87
Non-Cytoplasmic	54	79	0.88
Transmembrane Helix	80	103	0.81
Cytoplasmic	104	111	0.89
Transmembrane Helix	112	135	0.90
Non-Cytoplasmic	136	154	0.84
Transmembrane Helix	155	174	0.92
Cytoplasmic	175	423	0.92