YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110631441
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTKRFKINA ISLSIFLAYA LTPYSEAALV RDDVDYQIFR DFAENKGKFF VGATDLSVKN  60
   61 KQGQNIGNAL SNVPMIDFSV ADVNKRIATV VDPQYAVSVK HAKAEVHTFY YGQYNGHNDV 120
  121 ADKENEYRVV EQNNYKPHKA WNASNLGRLE DYNMARFNKF VTEVAPIAPT DAGGGLDTYK 180
  181 DKNRFSSFVR VGAGRQLVYE KGAYHPEGKE KGYDLRDLSQ AYRYAIAGTP YKDINIDQTM 240
  241 NTEGLIGFGN HNKQYSAEEL KQALSQDALT NYGVLGDSGS PLFAFDKQKN QWVFLGTYDY 300
  301 WADYGKKSWQ EWNIYKKEFA DEIKQRDNAG TIKGYGEHHW KTTGTNSHIG STAVRLAGNE 360
  361 RGANNGQNVT FENNGTLVLD QNINQGAGGL FFKGDYTVKG INNDITWLGA GIDVADGKKV 420
  421 VWQVKNPNGD RLAKIGKGTL EINGTGVNQG QLKVGDGTVI LNQKADSNQK VQAFSQVGIV 480
  481 SGRGTLVLNS PNQINPDNLY FGFRGGRLDA NGNDLTFEHI RNVDEGARIV NHNTGHTSTI 540
  541 TLTGKSLITN PNSLSVHSIQ NDYDEDDYSY YYRPRRPIPQ GKDLYYKNYR YYALKSGGSV 600
  601 NAPMPENGQT ENNDWILMGS TQEEAKKNAM NHKNNQRISG FSGFFGEENG KGHNGALNLN 660
  661 FNGKSAQNRF LLTGGTNLNG KISVTQGNVL LSGRPTPHAR DFVNKSSARK DAHFSKNNEV 720
  721 VFEDDWINRT FKATEIAVNQ SASFSSGRNV SDITANITAT DNAKVNLGYK NGDEVCVRSD 780
  781 YTGYVTCNTD NLSDKALNSF GATQINGNVN LSQNAALTLG KAALWGQIQG QGNSRVSLNQ 840
  841 HSKWHLTGDS QVHNLSLADS HIHLNNASDA QSANKYHTLK INHLSGNGHF HYLTHLAKNL 900
  901 GDKVLVKESA SGHYQLHVQD KTGEPNQEGL NLFDASSVRD RSHLSVSLAN NHVDLGALRY 960
  961 TIKTENGITR LYNPYAENRR RVKPAPSPAT NTASQAQTDS AQIAKPQNIV VAPPSPQANQ1020
 1021 AEEAKRQQAK AEQVKRQQAE AERKSAELAK QKAEAEREAR ELATRQKAEQ ERSSAELARR1080
 1081 HEKEREAAEL SAKQKVEAER EAQALAVRRK AEAEEAKRQA AELARRHEKE REAAELSAKQ1140
 1141 RVGEEERRQT AQSQPQRRKR RAAPQDYMAA SQDRPKRRGH RSVQQNNVEI AQAQAELARR1200
 1201 QQEERKAAEL LAKQRAEAER EAQALAARRK AEAEEAKRQA AELAHRQEAE RKAAELSANQ1260
 1261 KAAAEAQALA ARQQKALARQ QEEARKAAEL AVKQKAETER KTAELAKQRA AAEAAKRQQE1320
 1321 ARQTAELARR QEAERQAAEL SAKQKAETDR EAAESAKRKA EEEEHRQAAQ SQPQRRKRRA1380
 1381 APQDYMAASQ NRPKRRGRRS TLPAPPSPSF DSSAYAAPRA LHNPDWYEND YEEIPLDALE1440
 1441 DENVSESVDT SDKQPQDNTE LHEKYENDYE EIPLDALEDE DVSESVDTSD KQPQDNTELH1500
 1501 EKVETVSLQP RAAQPRAQAA AQPQAQADAV STNTNSALSD AMASTQSILL DTGASLTRHI1560
 1561 AQKSRADAEK NSVWMSNIGY GRDYASAQYR RFSSKRTQTQ IGIDRSLSEN MQIGGVLTYS1620
 1621 DSQHTFDQAS GKNTFVQANL YGKYYLNDAW YVAGDIGAGS LRSRLQTQQK ANFNRTSIQT1680
 1681 GLTLGNTLKI NQFEIVPSAG IRYSRLSSAD YKLGNDSVKV SSMSVKTLTA GLDFAYRFKV1740
 1741 GNLTVKPLLS AAYFANYGKG GVNVGGNSFA YKADNQQQYS AGAALLYRNV TLNVNGSITK1800
 1801 GKQLEKQKSG QIKIQIRF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle