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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YIDC_ROSDO
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDQNKNLIL ATALSFIVIL VWFVLFPPPE PEMPLTGETS TELTPDAATG SLPSVTSDTA  60
   61 PSVVIEGETR SAALEQAPRV EIATDRVKGS ISLLGGRIDD LSLKDYRETQ EEDADIVTML 120
  121 SPVGSPGAYY ALYGWAAGAG VDPSQVPGPD TEWQVIDGDI LSVDAPVTLQ WDNGAGLSFT 180
  181 RIIEIDDNYM FQITQSVANT SDAPVTVAPY GILARHGEPD DLKNFFILHE GVVAMADGEL 240
  241 TETNWDDIPE FPVDQREGVP AERIENVLNG WIGFTDHFWM SVLIPDPSAS ARLTTKYRPR 300
  301 ADIYQAETVL PAQTVAPGTS VSATTQLFAG AKEWETIRNY QTDGVDRFID SIDWGWFFFL 360
  361 TKPIFFLLHY LNAFIGNMGW AIIGLTLIIK AILLPLAYKS YVSMAKMKEL QPQMEKLKEE 420
  421 AGDDRQKMQQ GMMELYKKEK VNPAAGCLPI LLQIPIFFSL YKVIFVTIEL RHAPFFGPFQ 480
  481 DLSAPDPTSI MNLYGLLPFD GPEPGSIMAL IFIGILPLLL GISMWLQQKL NPAPTDPTQQ 540
  541 MIFAWMPWVF MFMLGGFASG LVVYWIANNT ITFVQQYMIM RSQGYKPDVF GNIKGGFQKK 600
  601 TKPDSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle