YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|118404044, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDRTRELRA AKDSDEDDEV TVSLDRDRFM DEFFEQVEEI RGFIDKIAEN VEEVKRKHSA  60
   61 ILASPNPDEK TKAELEELMS DIKKTANKVR SKLKGIEQSI EQEEAMNRSS ADLRIRKTQH 120
  121 STLSRKFVEV MSEYNATQSD YRERCKGRIQ RQLEITGRTT TSEELEDMLE SGNPAIFSSG 180
  181 IIMDSNITKQ ALNEIETRHS EIIKLENSIR ELHDMFMDMA MLVESQGEMI DRIEYNVEHS 240
  241 VDYVERAVSD TKKAVKYQSK ARRKKIMIII CCVVLGIVIA STFGGIFG

Type	Start	End	Confidence
Cytoplasmic	1	265	0.99
Transmembrane Helix	266	287	0.94
Non-Cytoplasmic	288	288	0.99