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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89515459
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKTSKYGLG FKWAPEFRWL LPDAAEELAS PMKSDEGGLC PSTGQAMESV GFVYDNHVKI  60
   61 DCRCILGQEW HVQSNLIRDI FVHEDLHVVE VLTKTAVKSG TAILIKSPLH SLGGFPKGYV 120
  121 MGLFRSYKTK RYVVHHLSMT TSTTNFGEDF LGWIVPFGFM PSYVHKWFQF CRLYIEESDL 180
  181 IISNFKFDDY DFSVEDAYAE VHAEPKGKYS QKAYALLRQY RGIKPVLFVD QYGCDYSGKL 240
  241 ADCLQAYGHY SLQDMRQKQS VWLANCDFDI VVAWHVVRDS RFVMRLQTIA TICGIKYVAQ 300
  301 PTEDVVDGDV VIREPVHLLS ADAIVLKLPS LMKVMTHMDD FSIKSIYNVD LCDCGFVMQY 360
  361 GYVDCFNDNC DFYGWVSGNM MDGFSCPLCC TVYDSSEVKA QSSGVIPENP VLFTNSTDTV 420
  421 NHDSFNLYGY SVTPFGSCIY WSPRPGLWIP IIKSSVKSYD DLVYSGVVGC KSIVKETALI 480
  481 THALYLDYVQ CKCGNLEQNH ILGVNNSWCR QLLLNRGDYN MLLKNIDLFV KRRADFACKF 540
  541 AVCGDGFVPF LLDGLIPRSY YLIQSGIFFT SLMSQFSQEV SDMCLKMCIL FMDRVSVATF 600
  601 YIEHYVNRLV TQFKLLGTTL VNKMVNWFNT MLDASAPATG WLLYQLLNGL FVVSQANFNF 660
  661 VALIPDYAKI LVNKFYTFFK LLLECVTVDV LKDMPVLKTI NGLVCIVGNK FYNVSTGLIP 720
  721 GFVLPCNAQE QQIYFFEGVA ESVIVEDDVI ENVKSSLSSY EYCQPPKSVE KICIIDNMYM 780
  781 GKCGDKFFPI VMNDKNICLL DQAWRFPCAG RKVNFNEKPV VMEIPSLMTV KVMFDLDSTF 840
  841 DDILGKVCSE FEVEKGVTVD DFVAVVCDAI ENALNSCKEH PVVGYQVRAF LNKLNENVVY 900
  901 LFDEAGDEAM ASRMYCTFAI EDVEDVISSE VVEDTIDGVV EDTINDDEDV VTGDNDDEHV 960
  961 VTGDNDDEHV VTGDNDDEDV VTGDNDDEDV VTGDNDDEDV VTGDNDDEDV VTGDNDDEDV1020
 1021 VTGDNDDEDV VTGDNDDEDV VTGDNDDEDV VTGDNDDEDV VTGDNDDEHV VTGDNDDEDV1080
 1081 VTGDNDDEDV VTGDNDDEDV VTGDNDDEDV VTGDNDDEDV VTGDNDDEDV VTGDNDDEDV1140
 1141 VTGDNDDDND DQIVVIGDDV DDIDTINCES IYEFDTYKAL LVFNDVYNDA LFVSYGSSVE1200
 1201 TETYFKVKGL WSPTITHTNC WLRSVLLVMQ KLPFKFKDLA IENMWLSYKV GYNQSFVDYL1260
 1261 LTTIPKAIVL PQGGFVADFA YWFLNQFDIN AYANWCCLKC GFSFDLNGLD AVFFYGDIVS1320
 1321 HVCKCGYNMT LIAADLPCTL HFSLFDDNFC AFCTPKKNFI AACAVDVNVC HSVAVIGDEQ1380
 1381 IDGKFVTKFS GDKFDFIVGY GMSFSMSSFE LAQLYGLCIT PNVCFVKGDI INVARLVKAD1440
 1441 VIVNPANGHM LHGGGVAKAI AVAAGKKFSK ETAAMVKSKG VCQVGDCYVS TGGKLCKTIL1500
 1501 NIVGPDARQD GRQSYVLLAR AYKHLNKYDC CLSTLISAGI FSVPADVSLT YLLGVVDKQV1560
 1561 ILVSNNKEDF DIIQKCQITS VVGTKALAVR LTANVGRVIK FETDAYKLFL SGDDCFVSNS1620
 1621 SVIQEVLLLR HDIQLNNDVR DYLLSKMTSL PKDWRLINKF DVINGVKTVK YFECPNSIYI1680
 1681 CSQGKDFGYV CDGSFYKATV NQVCVLLAKK IDVLLTVDGV NFKSISLTVG EVFGKILGNV1740
 1741 FCDGIDVTKL KCSDFYADKI LYQYENLSLA DISAVQSSFG FDQQQLLAYY NFLTVCKWSV1800
 1801 VVNGPFFSFE QSHNNCYVNV ACLMLQHINL KFNKWQWQEA WYEFRAGRPH RLVALVLAKG1860
 1861 HFKFDEPSDA TDFIRVVLKQ ADLSGAICEL ELICDCGIKQ ESRVGVDAVM HFGTLAKTDL1920
 1921 FNGYKIGCNC AGRIVHCTKL NVPFLICSNT PLSKDLPDDV VAANMFMGVG VGHYTHLKCG1980
 1981 SPYQHYDACS VKKYTGVSGC LTDCLYLKNL TQTFTSMLTN YFLDDVEMVA YNPDLSQYYC2040
 2041 DNGKYYTKPI IKAQFKPFAK VNGVYTNFKL VGHDICAQLN DKLGFNVDLP FVEYKVTVWP2100
 2101 VATGDVVLAS DDLYVKRYFK GCETFGKPVI WFCHDEASLN SLTYFNKPSF KSENRYSVLS2160
 2161 VDSVSEESQG NVVTSVMESQ ISTKEVKLKG VRKTVKIEDA IIVNDENSSI KVVKSLSLVD2220
 2221 VWDMYLTGCD YVVWVANELS RLVKSPTVRE YIRYGIKPIT IPIDLLCLRD DNQTLLVPKI2280
 2281 FKARAIEFYG FLKWLFIYVF SLLHFTNDKT IFYTTEIASK FTFNLFCLAL KNAFQTFRWS2340
 2341 IFIKGFLVVA TVFLFWFNFL YINVIFSDFY LPNISVFPIF VGRIVMWIKA TFGLVTICDF2400
 2401 YSKLGVGFTS HFCNGSFICE LCYSGFDMLD TYAAIDFVQY EVDRRVLFDY VSLVKLIVEL2460
 2461 VIGYSLYTVW FYPLFCLIGL QLFTTWLPDL FMLETMHWLI RFIVFVANML PAFVLLRFYI2520
 2521 VVTAMYKVVG FIRHIVYGCN KAGCLFCYKR NCSVRVKCST IVGGVIRYYD ITANGGTGFC2580
 2581 VKHQWNCFIC HSFKPGNTFI TVEAAIELSK ELKRPVNPTD ASHYVVTDIK QVGCMMRLFY2640
 2641 DRDGQRVYDD VDASLFVDIN NLLHSKVKVV PNLYVVVVES DADRANFLNA VVFYAQSLYR2700
 2701 PILLVDKKLI TTACNGISVT QTMFDVYVDT FMSHFDVDRK SFNNFVNIAH ASLREGVQLE2760
 2761 KVLDTFVGCV RKCCSIDSDV ETRFITKSMI SAVAAGLEFT DENYNNLVPT YLKSDNIVAA2820
 2821 DLGVLIQNGA KHVQGNVAKA ANISCIWFID AFNQLTADLQ HKLKKACVKT GLKLKLTFNK2880
 2881 QEASVPILTT PFSLKGGVVL SNLLYILFFI SLICFILLWA LLPTYSVYKS DIHLPAYASF2940
 2941 KVIDNGVVRD ISVNDLCFAN KFFQFDQWYE STFGSVYYHN SMDCPIVVAV MDEDIGSTMF3000
 3001 NVPTKVLRHG FHVLHFLTYA FASDSVQCYT PHIQISYNDF YASGCVLSSL CTMFKRGDGT3060
 3061 PHPYCYSDGV MKNASLYTSL VPHTRYSLAD SNGFIRFPDV ISEGIVRIVR TRSMTYCRVG3120
 3121 ACEYAEEGIC FNFNSSWVLN NDYYRSMPGT FCGRDLFDLF YQFFSSLIRP IDFFSLTASS3180
 3181 IFGAILAIVV VLVFYYLIKL KRAFGDYTSV VVINVVVWCI NFLMLFVFQV YPICACVYAC3240
 3241 FYFYVTLYFP SEISVIMHLQ WIVMYGAIMP FWFCVTYVAM VIANHVLWLF SYCRKIGVNV3300
 3301 CSDSTFEETS LTTFMITKDS YCRLKNSVSD VAYNRYLSLY NKYRYYSGKM DTAAYREAAC3360
 3361 SQLAKAMETF NHNNGNDVLY QPPTASVSTS FLQSGIVKMV SPTSKIEPCI VSVTYGSMTL3420
 3421 NGLWLDDKVY CPRHVICSSS NMNEPDYSAL LCRVTLGDFT IMSGRMSLTV VSYQMQGCQL3480
 3481 VLTVSLQNPY TPKYTFGNVK PGETFTVLAA YNGRPQGAFH VTMRSSYTIK GSFLCGSCGS3540
 3541 VGYVLTGDSV KFVYMHQLEL STGCHTGTDF TGNFYGPYRD AQVVQLPVKD YVQTVNVIAW3600
 3601 LYAAILNNCA WFVQNDVCST EDFNVWAMAN GFSQVKADLV LDALASMTGV SIETLLAAIK3660
 3661 RLYMGFQGRQ ILGSCTFEDE LAPSDVYQQL AGVKLQSKTK RFIKETIYWI LISTFLFSCI3720
 3721 ISAFVKWTIF MYINTHMIGV TLCVLCFVSF MMLLVKHKHF YLTMYIIPVL CTLFYVNYLV3780
 3781 VYKEGFRGFT YVWLSYFVPA VNFTYVYEVF YGCILCVFAI FITMHSINHD IFSLMFLVGR3840
 3841 IVTLISMWYF GSNLEEDVLL FITAFLGTYT WTTILSLAIA KIVANWLSVN IFYFTDVPYI3900
 3901 KLILLSYLFI GYILSCYWGF FSLLNSVFRM PMGVYNYKIS VQELRYMNAN GLRPPRNSFE3960
 3961 AILLNLKLLG IGGVPVIEVS QIQSKLTDVK CANVVLLNCL QHLHVASNSK LWQYCSVLHN4020
 4021 EILSTSDLSV AFDKLAQLLI VLFANPAAVD TKCLASIDEV SDDYVQDSTV LQALQSEFVN4080
 4081 MASFVEYEVA KKNLADAKNS GSVNQQQIKQ LEKACNIAKS VYERDKAVAR KLERMADLAL4140
 4141 TNMYKEARIN DKKSKVVSAL QTMLFSMVRK LDNQALNSIL DNAVKGCVPL SAIPALAANT4200
 4201 LTIIIPDKQV FDKVVDNVYV TYAGSVWHIQ TVQDADGINK QLTDISVDSN WPLVIIANRY4260
 4261 NEVANAVMQN NELMPHKLKI QVVNSGSDMN CNIPTQCYYN NGSSGRIVYA VLSDVDGLKY4320
 4321 TKIMKDDGNC VVLELDPPCK FSIQDVKGLK IKYLYFIKGC NTLARGWVVG TLSSTIRLQA4380
 4381 GVATEYAANS SILSLCAFSV DPKKTYLDYI QQGGVPIINC VKMLCDHAGT GMAITIKPEA4440
 4441 TINQDSYGGA SVCIYCRARV EHPDVDGICK LRGKFVQVPL GIKDPILYVL THDVCQVCGF4500
 4501 WRDGSCSCVG SSVAVQSKDL NFLNRVRGTS VNARLVPCAS GLSTDVQLRA FDICNTNRAG4560
 4561 IGLYYKVNCC RFQRIDDDGN KLDKFFVVKR TNLEVYNKEK TYYELTKSCG VVAEHDFFTF4620
 4621 DIDGSRVPHI VRRNLSKYTM LDLCYALRHF DRNDCSILCE ILCEYADCKE SYFSKKDWYD4680
 4681 FVENPDIINI YKKLGPIFNR ALLNTVIFAD TLVEVGLVGV LTLDNQDLYG QWYDFGDFIQ4740
 4741 TAPGFGVAVA DSYYSYMMPM LTMCHVLDCE LFVNDSYRQF DLVQYDFTDY KLELFNKYFK4800
 4801 YWGMKYHPNT VDCDNDRCII HCANFNILFS MVLPNTCFGP LVRQIFVDGV PFVVSIGYHY4860
 4861 KELGVVMNLD VDTHRYRLSL KDLLLYAADP AMHVASASAL LDLRTCCFSV AAITSGIKFQ4920
 4921 TVKPGNFNQD FYEFVKSKGL FKEGSTVDLK HFFFTQDGNA AITDYNYYKY NLPTMVDIKQ4980
 4981 LLFVLEVVYK YFEIYDGGCI PASQVIVNNY DKSAGYPFNK FGKARLYYEA LSFEEQNEIY5040
 5041 AYTKRNVLPT LTQMNLKYAI SAKNRARTVA GVSILSTMTG RMFHQKCLKS IAATRGVPVV5100
 5101 IGTTKFYGGW DDMLRHLIKD VDNPVLMGWD YPKCDRAMPN ILRIVSSLVL ARKHEFCCSH5160
 5161 GDRFYRLANE CAQVLSEIVM CGGCYYVKPG GTSSGDATTA FANSVFNICQ AVTANVCSLM5220
 5221 ACNGHKIEDL SIRNLQKRLY SNVYRTDYVD YTFVNEYYEF LCKHFSMMIL SDDGVVCYNS5280
 5281 DYASKGYIAN ISVFQQVLYY QNNVFMSESK CWVENDITNG PHEFCSQHTM LVKIDGDYVY5340
 5341 LPYPDPSRIL GAGCFVDDLL KTDSVLLIER FVSLAIDAYP LVYHENEEYQ KVFRVYLEYI5400
 5401 KKLYNDLGTQ ILDSYSVILS TCDGLKFTEE SFYKNMYLKS AVMQSVGACV VCSSQTSLRC5460
 5461 GSCIRKPLLC CKCCYDHVMA TNHKYVLSVS PYVCNAPNCD VSDVTKLYLG GMSYYCENHK5520
 5521 PHYSFKLVMN GMVFGLYKQS CTGSPYIDDF NKIASCKWTE VDDYVLANEC IERLKLFAAE5580
 5581 TQKATEEAFK QSYASATIQE IVSDREVILC WETGKVKPPL NKNYVFTGYH FTSTGKTVLG5640
 5641 EYVFDKSELT NGVYYRATTT YKLSIGDVFV LTSHSVASLS APTLVPQENY ASIRFSSVYS5700
 5701 VPLVFQNNVA NYQHIGMKRY CTVQGPPGTG KSHLAIGLAV YYYTARVVYT AASHAAVDAL5760
 5761 CEKAYKFLNI NDCTRIIPAK VRVDCYDKFK INDTTCKYVF TTINALPELV TDIVVVDEVS5820
 5821 MLTNYELSVI NARIKAKHYV YIGDPAQLPA PRVLLSKGSL EPRHFNSITK IMCCLGPDIF5880
 5881 LGNCYRCPKE IVETVSALVY DNKLKAKNDN SSLCFKVYFK GQTTHESSSA VNIQQIYLIS5940
 5941 KFLKANPVWN SAVFISPYNS QNYVAKRVLG VQTQTVDSAQ GSEYDYVIYS QTAETAHSVN6000
 6001 VNRFNVAITR AKKGIFCVMS NMQLFESLNF ITLPLDKIQN QTLPRLHCTT NLFKDCSKSC6060
 6061 LGYHPAHAPS FLAVDDKYKV NENLAVNLNI CEPVLTYSRL ISLMGFKLDL TLDGYSKLFI6120
 6121 TKDEAIKRVR GWVGFDVEGA HATRENIGTN FPLQIGFSTG VDFVVEATGL FAERDCYTFK6180
 6181 KTVAKAPPGE KFKHLIPLMS KGQKWDIVRI RIVQMLSDYL LDLSDSVVFI TWSASFELTC6240
 6241 LRYFAKLGRE LNCNVCSNRA TCYNSRTGYY GCWRHSYTCD YVYNPLIVDI QQWGYTGSLT6300
 6301 SNHDIICNVH KGAHVASADA IMTRCLAIYD CFCKSVNWNL EYPIISNEVS INTSCRLLQR6360
 6361 VMLKAAMLCN RYNLCYDIGN PKGLACVKDY EFKFYDAFPV AKSVKQLFYV YDVHKDNFKD6420
 6421 GLCMFWNCNV DKYPSNSIVC RFDTRVLNKL NLPGCNGGSL YVNKHAFHTN PFTRTVFENL6480
 6481 KPMPFFYYSD TPCVYVDGLE SKQVDYVPLR SATCITRCNL GGAVCSKHAE EYCNYLESYN6540
 6541 IVTTAGFTFW VYKNFDFYNL WNTFTTLQSL ENVIYNLVNV GHYDGRTGEL PCAIMNDKVV6600
 6601 VKINNVDTVI FKNNTSFPTN IAVELFTKRS IRHHPELKIL RNLNIDICWK HVLWDYVKDS6660
 6661 LFCSSTYGVC KYTDLKFIEN LNILFDGRDT GALEAFRKAR NGVFISTEKL SRLSMIKGPQ6720
 6721 RADLNGVIVD KVGELKVEFW FAMRKDGDDV IFSRTDSLCS SHYWSPQGNL GGNCAGNVIG6780
 6781 NDALTRFTIF TQSRVLSSFE PRSDLERDFI DMDDNLFIAK YGLEDYAFDH IVYGSFNHKV6840
 6841 IGGLHLLIGL FRRLKKSNLL IQEFLQYDSS IHSYFITDQE CGSSKSVCTV IDLLLDDFVS6900
 6901 IVKSLNLSCV SKVVNINVDF KDFQFMLWCN DNKIMTFYPK MQATNDWKPG YSMPVLYKYL6960
 6961 NVPLERVSLW NYGKPINLPT GCMMNVAKYT QLCQYLNTTT LAVPVNMRVL HLGAGSDKEV7020
 7021 APGSAVLRQW LPSGSILVDN DLNPFVSDSL VTYFGDCMTL PFDCHWDLII SDMYDPLTKN7080
 7081 IGDYNVSKDG FFTYICHLIR DKLSLGGSVA IKITEFSWNA DLYKLMSCFA FWTVFCTNVN7140
 7141 ASSSEGFLIG INYLGKSSFE IDGNVMHANY LFWRNSTTWN GGAYSLFDMT KFSLKLAGTA7200
 7201 VVNLRPDQLN DLVYSLIERG KLLVRDTRKE IFVGDSLVNT C

YRC Informatics Platform - Version 3.0
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