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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109511131, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.66
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLPLLLALV VCSAVSTNLK MVSKRNSVDG CIDWSVDLKT YMALAGEPVR VKCALFYSYI  60
   61 RTNYSMAQST GLRLMWYRNK GDLEEPIIFS EVRMSKEEDA IWFHSAEAQD SGFYTCVLRN 120
  121 STYCMKVSMS LTVAENESGL CYNSRIRYLE KSEVTKRKEI SCPDMDDFKK SDQEPDVVWY 180
  181 KECKPKMWRS IIIQKGNALL IQEVQEEDGG NYTCELKYEG KLVRRTTELK VTALLTDKPP 240
  241 KPLFPMENQP SVIDVQLGKP LNIPCKAFFG FSGESGPMIY WMKGEKFIEE LAGHIREGEI 300
  301 RLLKEHLGEK EVELTLIFDS VVEADLANYT CHVENRNGRK HASVLLRKKD LIYKIELAGG 360
  361 LGAIFLLLIL LLVVYKCYNI ELMLFYRQRF GGDETTDDNK EYDAYLSYTK VDQDTLDCDN 420
  421 TEEEQFALEI LPDVLEKHYG YKLFIPERDL IPSGTYIEDL TRCVEQSRRL IIVLTPDYIL 480
  481 RRGWSIFELE SRLHNMLVSG EIKVILIECT ELKGKVNCPE VESLKHNIKL LSLIKWKGPK 540
  541 SSKLNSKFWK HLVYEMPIKK KEMLSHCHVL DSAEQGLFGE LQPIPSIAMT STSATMVPSQ 600
  601 ADLPEFHHSD SMQMRHCCRG YKHEMPANTL SVPSLGNHHT YCNLPLTLLN GQLPLNNSLK 660
  661 ETEELSRNNP LLPLSSKELS FTSDIW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle