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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109509884, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPETVEVE PEPNIRGPEI VTMGENDPPA AEAPFSFRSL FGLDDLKISS VAPDGDAVAA  60
   61 QILSLLPLKF FPIIVIGIIA LILALAIGLG IHFDCSGKYR CHSSFKCIEL TARCDGVPNC 120
  121 KDGEDEYRCV RVSGQRAALQ VFTAAAWRTM CSDDWKSHYA KIACAQLGFP SYVSSDHLRV 180
  181 DALEEQFQGD FVSINHLLPD DKVTALHHSV YMREGCTSGH VVTLKCSACG MRTGYSPRIV 240
  241 GGNVSSLTQW PWQVSLQFQG YHLCGGSVIT PLWIVTAAHC VYDLYHPKSW TVQVGLVSLM 300
  301 DSPVPSHLVE KIIYHSKYKP KRLGNDIALM KLSEPLTFDE TIQPICLPNS EENFPDGKLC 360
  361 WTSGWGATED GGDASPVLNH AAVPLISNKI CNHRDVYGGI ISPSMLCAGY LKGGVDSCQG 420
  421 DSGGPLVCQE RRLWKLVGAT SFGIGCAEVN KPGVYTRITS FLDWIHEQLE RDLKT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle