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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109509195, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGAVAENHW DGVGGGKESQ AVFELRATCS PEPAISKKDL QEQTGPVQKA VAFPSAQGRV  60
   61 AYLGTLMKPV PLPTQIRRVP AQVCGGQPET PSPRPDAVLA RHPHSRNAGG FCSNGSGTAG 120
  121 LCVRSTAASQ AGAESVPSVC APAGHRKPAN PGTMQTERSS QGFGNRYRQI PFMYDVKRSV 180
  181 YNEENFQQEH RRKGPTSGNM DINITTFKHH VQCRCSWHKF LRCMLTVFPF LEWMCLYRFK 240
  241 DWLLGDLLAG LSVGLVQVPQ GLTLSLLTRQ LIPPLNVAYA AFCSSVIYVI FGSCHQMSIG 300
  301 PFFLVSALMI NVLKERPFNN GHLIMGTFVK DDFSVPTFYL NYNRSLSMVA STTFLTGIIQ 360
  361 LSMGMLGMGF VATYLPEAAT SAYLAAVALH IILAQMTCIF GIMVSFHAGP IAFIYNIINY 420
  421 CIALPKANST SILLFLTAVV ALRVNKCIRI SFNRYPIEFP MELLLILGFS MLTSRITMAT 480
  481 ENSKMLINMI PYSFVFPETP EFGILSRIVL QALSLSVVSS FLLISLGKKI ANLHNYRTNS 540
  541 NQDLIAIGLC NLVSSFFRCC VFTGGMARTI IQDKSGGRQQ FASLVGAGVM LLLMVKIGSF 600
  601 FDNLPNAVLA GIILSNVVPY LETIYNLPTL WRQDQYECVV WMVTFSAAIF LGLDVGLLIS 660
  661 LVFTFFVITV RSHRTKILVL GQIPNTNIYR NVNEYREVIL IPGVKILQCC SSITFVNVYH 720
  721 LKHKLLKEVN MVKLPLKEEE IYALFHESET SIAENKLCRC FCDCEELEPE SRVVYTERYE 780
  781 NKQEHGSSIN LIRCSYLGSG DSSQTTSEEQ VPYTVSSTSQ RNIGQNYEDT EKAWLPNSPP 840
  841 RNSSLPPPEN SESLAQSRSR SVILPYSDTH TIILDFSMVH YVDNRALVVL RQMCNAFHNA 900
  901 DILVLISGCH TSVVKLFEKN DFFDDGITKA QLFLSLHDAV LFALSRKCSE PSDLSVDETE 960
  961 TVIQETYSES DKNDNLSNLR FKPGNVIMEG SQHASPNYTK THRPAKNDLE FDLDPDRLLA1020
 1021 SDQTSGMDLN LDLDLDLGRE SDLDPGSELG SEIQAKPELE SELEIDVQTE PETEEESERE1080
 1081 RKSQPRTRTR AQSPWQSYLT AYRFGSTSSQ SAGPPQTPQT RPAEKR

YRC Informatics Platform - Version 3.0
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