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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109505250
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTRDESVLV TTLEKSNSRQ FLIYNEDHKR CVDALSAISV QTATCNPEAE SQKFRWVSES  60
   61 QIMSVAFKLC LGVPSKTDWA SVTLYACDSK SEFQKWECKN DTLFGIKGTE LYFNYGNRQE 120
  121 KNIKLYKGSG LWSRWKVYGT TDDLCSRGYE AMYSLLGNAN GAVCAFPFKF ENKWYADCTS 180
  181 AGRSDGWLWC GTTTDYDTDK LFGFCPLQFE GSKRLWNTDP LTGILYQINS KSALTWHQAR 240
  241 ASCKQQNAEL LSVTEIHEQM YLTGLTSSLT SGLWIGLNSL SLSTGWQWAG GSPFRYLNWL 300
  301 PESDVPTACP NQWWPYAGHC YRIYREEKKI QKYALQACRK EGGDLASIHS IEEFDFIFSQ 360
  361 LGYEPNDELW IGLNDIKIQM YFEWSDGTPV TFTKWLPGEP SHENNRQEDC VVMKGKDGYW 420
  421 ADRACEQPLG YICKMVSQIH TVIPEGAEKG CRKGWKRHGF YCYLIGSTLS TFADANQTCT 480
  481 NEKAYLTTVE DRYEQAFLTS LVGLRPEKYF WTGLSDVQNK GTFRWTVDEQ VQFTHWNADM 540
  541 PGRKAGCVAM KTGVAGGLWD VLSCEEKAKF VCKHWAEGVT RPPEPTTTPE PKCPEDWGTT 600
  601 SKTSMCFKLY AKGKHEKKTW FESRDFCKAI GGELASIKSK DEQQVIWRLI TSSGSYHELF 660
  661 WLGLTYGSPS EGFTWSDGSP VSYENWAYGE PNNYQNVEYC GELKGDPGMS WNDINCEHLN 720
  721 NWICQIQKDP PVTADGWVIY KDYQYYFSKE KETMDNARAF CKKNFGDLAT IKSESEKKFL 780
  781 WKYINKNGGQ SPYFIGLLIS LDKKFIWMDG SKVDFVAWAT GEPNFANDDE NCVTMYTNSG 840
  841 FWNDINCGYP NNFICQRHNS SINATAMPTT PPTPGGCKEA FVTYHMRDST FNAWTGLNDV 900
  901 NSEHTFLWTD GRGVHYTNWG KGYPGGRRSS LSYEDVDCVV VIGGNSREAG TWMDSTCDSK 960
  961 QGYICQTQTD PSVPISPTTA PKDGFVKYGK SSYALMKLKS PWHEAEKYCK DRTSLLASIL1020
 1021 DPYSNAFAWM KMHPFNVPIW IALNSNLTNN EYTWTDKWRV RYTNWGTDEP KLKSACVYMD1080
 1081 VDGYWKTSYC NESFYFLCKK SDEIPATEPP QLPGKCPESE QTAWIPFHGH CYYIESSFTR1140
 1141 SWGQASLECL RMGASLVSIE TAAESSFLSY RVEPLKSKTN FWIGMFRNVE ADQRKMDPQP1200
 1201 KGSSKAAGVV IVVLLIVIGA GVAAYFFYKK RRVLHIPQEA TFENTLYFNS NPSPGTSDTK1260
 1261 DLVGNIEQNE HAVI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle