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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109504419
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMRAVLQGT LTACCFPPAQ ADAATSFLRA ARSGNLDKAL DHLRNGVDIN TCNQNGLNGL  60
   61 HLASKEGHVK MVVELLHKEI ILETTTKRGN QPKHGPGLPG SCAAHRSQVQ FPASTSAGSQ 120
  121 PSKGFTPLYM AAQENHLEVV KFLLENGANQ NVATEDGFTP LAVALQQGHE NVVAHLINYG 180
  181 TKGKVRLPAL HIAARNDDTR TAAVLLQNDP NPDVLSKTGF TPLHIAAHYE NLNVAQLLLN 240
  241 RGASVNFTPQ NGITPLHIAS RRGNVIMVRL LLDRGAQIET RTKDELTPLH CAARNGHVRI 300
  301 SEILLDHGAP IQAKTKNGLS PIHMAAQGDH LDCVRLLLQY NAEIDDITLD HLTPLHVAAH 360
  361 CGHHRVAKVL LDKGAKPNSR ALNGFTPLHI ACKKNHIRVM ELLLKTGASI DAVTESGLTP 420
  421 LHVASFMGHL PIVKNLLQRG ASPNVSNVKV ETPLHMAARA GHTEVAKYLL QNKAKANAKA 480
  481 KDDQTPLHCA ARIGHTSMVK LLLENDASPN LATTAGHTPL HTAAREGHVD TALALLEKEA 540
  541 SQACMTKKGF TPLHVAAKYG KVRLAELLLE HDAHPNAAGK NGLTPLHVAV HHNNLDIVQL 600
  601 LLPRGGSPHS PAWNGYTPLH IAAKQNQIEV ARSLLQYGGS ANAESVQGVT PLHLAAQEGH 660
  661 TEMVALLLSK QANGNLGNKS GLTPLHLVAQ EGHVPVADVL IKHGVTVDAT TRMGYTPLHV 720
  721 ASHYGNIKLV KFLLQHQADV NAKTKLGYSP LHQAAQQGHT DIVTLLLKNG ASPNEVSSNG 780
  781 TTPLAIAKRL GYISVTDVLK VVTDETSVVL VSDKHRMSYP ETVDEILDVS EDEGTAHISL 840
  841 TGDELVGSKA ERRDSRDVGE EKELLDFVPK LDQVVESPAI PRIPCVTPET VVIRSEDQEQ 900
  901 ASKEYDEDSL IPSSPATETS DNISPVASPV HTGFLVSFMV DARGGSMRGS RHNGLRVVIP 960
  961 PRTCAAPTRI TCRLVKPQKL STPPPLAEEE GLASRIIALG PTGAQFLSPV IVEIPHFASH1020
 1021 GRGDRELVVL RSENGSVWKE HKSRYGESYL DQILNGMDEE LGSLEELEKK RVCRIITTDF1080
 1081 PLYFVIMSRL CQDYDTIGPE GGSLRSKLVP LVQATFPENA VTKKVKLALQ AQPVPDELVT1140
 1141 KLLGNQATFS PIVTVEPRRR KFHRPIGLRI PLPPSWTDNP RDSGEGDTTS LRLLCSVIGG1200
 1201 TDQAQWEDIT GTTKLVYANE CANFTTNVSA RFWLSDCPRT AEAVHFATLL YKELTAVPYM1260
 1261 AKFVIFAKMN DPREGRLRCY CMTDDKVDKT LEQHENFVEV ARSRDIEVLE GMPLFAELSG1320
 1321 NLVPVKKAAQ QRSFHFQSFR ENRLAIPVKV RDSSREPGGF LSFLRKPMKY EDAQHILCHL1380
 1381 NVTMPPCTKG SGAEDRRRTL TPLTLRYSIL SESRLGFTSD TDRVEMKMAV IREHLGLSWA1440
 1441 GELWNLDKKK NSLISMXRHG PSSWVTRAGN NTEMENLYTA LRNIDRSEIV NMLEGSGRQS1500
 1501 RNLKPDRRHG DREYSLSPSQ VNGYSSLQDE LLSPASLHYA LPSPLCADQY WNEVAVIDAI1560
 1561 PLAATEHDTM LEMSDMQVWS SGLTPSLVTA EDSSLECSKA EDSDAIPEWK LEGAHSEDTQ1620
 1621 GPELGSQDLV EDDTVDSDAT NGLADLLGQQ RVHARITDSP SVRQVLDRSQ ARTVDWYKQG1680
 1681 SAASYPQEAA QSSWQEEVTQ GPQSFQRRIT TIQGPEPGTL QEYEQVVVST REHVQRGPPE1740
 1741 SDSPKAGKDP SLWASESAFS QEVQGDELQN IPGEQVTEEQ FTDEQGNIVT KKIIRKVVRQ1800
 1801 VDSSGAIDTQ QHEEVELRGS GLQPDLIEGR KGAQIVKRAS LKRGKQ

YRC Informatics Platform - Version 3.0
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