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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109500055
Protein type: Globular with Signal Peptide
Type Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAAGAVPVL AHQSEGGSGG GEDEKLGCAR TSRVPHPPGR QGCPVSSLEA EESGRGPGTS  60
   61 SAGQASQHLC YNGDKVGQST SKSENLAKSG FSPQPRSQPE HALGLQVLMN NDINSSVESL 120
  121 NSACNMQSDT DTVPLLENGQ SASNQPSASS SRGQPQASPR QKMQRSQPVH IQPLRRLQEE 180
  181 DQQLRTSSLP AIPNPFPELA GGAPGSPPSV APSSLPPPPS QPPAKHFPPG FQLAKLTRPG 240
  241 LWTKTTARFS KRQPKNQCQT DTANAVSRIP TSQMEKLRLR KDVKVFSEDG TSKVVEILTD 300
  301 MTARDLCQLL VYKSHCVDDN SWTLVEHHPQ LGLERCLEDH EIVVQVESTM PSESKFLFRK 360
  361 NYAKYEFFKN PVNFFPDQMV TWCQQSNGGQ AQLLQNFLNS SSCPEIQGFL QVKEVGRKSW 420
  421 KKLYVCLRRS GLYYSTKGTS KEPRHLQLLA DLEESSIFYL IAGKKQYNAP NEHGMCIKPN 480
  481 KAKIEMKELR LLCAEDEQIR TCWMTAFRLL KYGMLLYQNY RIPQQRKGLA PPFNAPMRSV 540
  541 SENSLVAMDF SGQIGRVIDN PAEAQSAALE EGHAWRKRST RMNILSSQSP LHPSTLNSVI 600
  601 HRTQHWFHGR ISREESHRII KQQGLVDGLF LLRDSQSNPK AFVLTLCHQQ KIRNFQILPC 660
  661 EDDGQTFFTL DDGNTKFSDL IQLVDFYQLN KGVLPCKLKH HCIRVAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle