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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109489194
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRCNDIQSF GRASTVTLPE ALLFVSTLDG SLHAVSKRTG SIKWTLKEDP VLQVPTHVEE  60
   61 PAFLPDPNDG SLYTLGGKNN EGLTKLPFTI PELVQASPCR SSDGILYMGK KQDIWYVIDL 120
  121 LTGEKQQTLS SAFADSLCPS TSLLYLGRTE YTITMYDTKT RELRWNATYF DYAASLPEDD 180
  181 VDYKMSHFVS NGDGLVVTVD SESGDVLWIQ NYASPVVAFY IWQREGLRKV VHINVAVETL 240
  241 RYLTFMSGEV GRITKWKYPF PKETEAKSKL TPTLYVGKYS TSLYASPSMV HEGVAVVPRG 300
  301 STLPLLEGPQ TDGVTIGDKG ECVITPSTDL KFDPGLKGKS KLNYLRNYWL LIGHHETPLS 360
  361 ASTKMLERFP NNLPKHRENV IPADSEKRSF EEVINLVGQT SENTPTTVSQ DVEEKLPRAP 420
  421 AKPEAPVDSM LKDMATIILS TFLLVGWVAF IITYPLSMHQ QRQLQHQQFQ KELEKIQLLQ 480
  481 QQQLPFHPHG DLTQDPDFLD SSGLFSESSG TSSPSPSPRA SNHSLNSSSS ASKAGTSPSL 540
  541 EPDDEDEETR MVIVGKISFC PKDVLGHGAE GTIVYKGMFD NRDVAVKRIL PECFSFADRE 600
  601 VQLLRESDEH PNVIRYFCTE KDRQFQYIAI ELCAATLQEY VEQKDFAHLG LEPITLLHQT 660
  661 TSGLAHLHSL NIVHRDLKPH NILLSMPNAH GRIKAMISDF GLCKKLAVGR HSFSRRSGVP 720
  721 GTEGWIAPEM LSEDCKENPT YTVDIFSAGC VFYYVISEGN HPFGKSLQRQ ANILLGACSL 780
  781 DCFHSDKHED VIARELIEKM IAMDPQQRPS AKHVLKHPFF WSLEKQLQFF QDVSDRIEKE 840
  841 SLDGPIVRQL ERGGRAVVKM DWRENITVPL QTDLRKFRTY KGGSVRDLLR AMRNKRHHYR 900
  901 ELPLEVQETL GSIPDDFVRY FTSRFPHLLS HTYRAMELCR HERLFQTYYW HEPTEAQPPG 960
  961 IPDAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle