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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109489134
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCGGWRRSR RSPEEPRVSA QVAAPLAFLP SPASSDSSTK RPGLRALKKM GLTEDEDVQA  60
   61 MLRGSKLLKI RSRTWHKERL YRLQEDGLSV WFQRRIPRAA SQHIFFVQHI EAVREGHQSE 120
  121 GLRRFGGAFA PARCLTIAFK GRRKNLDLAA PTAEEAQRWV RGLAKLRARL DAMSQRERLD 180
  181 HWIHSYLHRA DSDQDSKMSF KEIKSLLRMV NVDMNDMYAY RLFKECDHSN NERLEGAEIE 240
  241 AFLRRLLKRP ELEEIFRRYS GEDRVLSASE LLEFLEDQGE DGATLACAQK LIQTYELNET 300
  301 AKQHELMTLD GFMMYLLSPE GAALNVAHTC VFQDMGQPLA HYFISSSHNT YLTDSQIGGT 360
  361 SSTEAYIRAF TQGCRCVELD CWEGPGGEPV IYHGHTLTSK ILFRDVIQAV RDHAFTLSPY 420
  421 PVILSLENHC GLEQQIVMAR HLRNILGDML VTQALDSQNP EELPSPEQLK CRVLVKGKKL 480
  481 PAARNEDGRI LSDREDEDED EEEAEEALET AEQRKRAKQI SPELSALVVY CCATRLRTLE 540
  541 PSPGPPQPCK IGSLSERKAR KFTREAGTSF VRHNTQQLTR VYPLGLRMTS ANYNPQEMWN 600
  601 SGCQLVALNF QTPGYEMDLN TGRFLINGQC GYVLKPAYLR QLNTTFDPEC PGPPRTTLTV 660
  661 QVLTAQQLPK LNVEKPNSIV DPLVRVEIYG VPEDCAHKET DYVLNNGFNP CWEQTLQFQL 720
  721 RAPELVLVRF VVEDYDTTSP NDFVGQFTLP LNSLKQGYRH IHLLSKDGAS LSPATLFVHI 780
  781 RIENS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle