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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109485422
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLLPLLQA SLLLMLLLRL PEASTNLDWQ CPRIPFAASR DFSVKYVVPS FSAGGRVQAT  60
   61 AVYEDSKNSA VFVAIRNRLH VLGPDLQYIE SLTTGPIGDP GCQTCASCGP GPHGPPNDTD 120
  121 TLVLVMEPGL PALVSCGSTL QGRCFLHELE PQGEALHLAA PACLFSASNN KPEACTDCVA 180
  181 SHLGTRVTVV EQGHASYFYV ASSLDPELAA SFSPRSVSIR RLKSDTSGFQ PGFPSLSVLP 240
  241 KYLASYLIKY VHSFHSGDFV YFLTVQPMDV RSPPSALQTR LVRLNAIEPE IGDYRELVLD 300
  301 CHFAPKRRRR SGAPKSLQAY QVLQAAHSAP VDAKLALDLS ISEGQEVLFG VFVAVKDSSS 360
  361 GPNSVVCAFP INHLDNLIEE GVERCCHPSN SSLLTRRRGL DFFQTPSFCP NPPGAPSSRC 420
  421 HYFPLMVHDS FTRVDLFNGL LGSVKVTALH VTRLGNVTVA HMGTEDGRIL QVEIARSLNY 480
  481 LLYVSNFSLG SSGQPVHQDV SRLGNDLLFA SGDQVFKVPI QGPGCGHFLT CWRCLRAQRF 540
  541 MGCGWCGDRC GRQKECPGSW QQDYCPPEIT EFHPHSGPLR GTTRLTLCGS NFYLRPDGVV 600
  601 PEGTHQITVG QSPCRLLPKD SSTRRSGSQK EFIEELECEL EPLETQAVGT TNISLLITNM 660
  661 PAGKHFRVEG VSVREDFSFM EPMLTSIKPD FGPRAGGTYL TLEGQKPVCR HQPSCVGQRN 720
  721 SVPAGTGQXG EDPVCHASWS WHSQRPPSSA DRGCRGAWLP HLSLQGRPYC VGHQSQVWLQ 780
  781 RLPRHGPRPA SDFSVAPHSI IQRWTKYSGE QVCRAVSGTA APVSSAXIHG PKPSGVGNRE 840
  841 SEPLGGWGSR LHVAWFPLPA PTQSPQNWPS PAEAXRAFSX GRVYWAGRCG GLCDGERDRG 900
  901 WXGLPTXAPG GCGDLPSATF PATWQGWCPV AGLCRWWVSH PGPGCSVRPR QGFTEDTSYC 960
  961 SSGLDPARGW AGHRTGLXLP KTEKAASPYS QPGXPDIPGS VSQSHVPVYI PLWLXLQKWP1020
 1021 CTLXLXXHSF QTSKPXRIFR GSGWDKCPAA ADRLYPAPGS GQDAPSRGQG CTDSPXASGH1080
 1081 PYXPSHWQRP LWRCLPRRIH RRSTESDPLC HQVSESHHGG TGGRGFPAGG ADHAWPPSPK1140
 1141 HSGSHRYHAT PRGSSPRAVA LYAPWRPAPF HSLPSEEPHC ERPHQLWPAG SLWHGVPGRA1200
 1201 EVRAQRPGCX ELHAGRVVHS QGGXLWSGTW HPRQGILXCS TTSPCSPTCQ VDGTGEPSDL1260
 1261 QIHHQVXRVV IRCVTVGATN TGCPALPPYX SLRPLSLPGS GPPPASAXVL SRFTVPGDAS1320
 1321 MLGGXSSSTT HLQSPSAGSR AGSVLTAWGP LRAADRSLRE RRPRRGGXWE CVSGTGAVLA1380
 1381 PASQEHVKAP APLRATSAHL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle