YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157823511, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKRRGSPC SMLSLKAHAF SVEALIGAEK QQQLQKKRRK LATEEAAGAV DDAGCSRGGG  60
   61 AREHRCTEAD EDPAPPPPAA GSASGPARSC TDAERSCASR GPAGSCEDGF LQGASPLASP 120
  121 GGSPKGSPVP GLARPGTPLP APQAPRVDLQ GAELWKRFHE IGTEMIITKA GRRMFPAMRV 180
  181 KISGLDPHQQ YYIAMDIVPV DNKRYRYVYH SSKWMVAGNA DSPVPPRVYI HPDSPASGET 240
  241 WMRQVISFDK LKLTNNELDD QGHIILHSMH KYQPRVHIIR KDCGDDLSPI KPVPSGEGVK 300
  301 AFSFPETVFT TVTAYQNQQI TRLKIDRNPF AKGFRDSGRN RMGLEALVES YAFWRPSLRT 360
  361 LTFEDIPGIP KQGNTSSSAL LPGTGNGVPA AHPHLLSGSS CSSPAFHLGP NTSQLCSMAP 420
  421 ADYSACARSG LALNRYSTSL AETYNRLTNQ SSETFAPPRT PSYVSVSSPS VNMSMGGTDG 480
  481 DTFSCPQTSL SMQISGMSPQ LQYIIPSPSS NAFAANQTHQ GSYNTFRLHS PCALYGYNFS 540
  541 TSPKLAASPE KIVSSQGSFL GSSPSGTMTD RQMLPPVEGV HLLGSGNQQS FFDSRTLGSL 600
  601 TLSSSQVSAH MV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle